Literature DB >> 30617047

Protein Phase Separation as a Stress Survival Strategy.

Titus M Franzmann1, Simon Alberti1.   

Abstract

Cells under stress must adjust their physiology, metabolism, and architecture to adapt to the new conditions. Most importantly, they must down-regulate general gene expression, but at the same time induce synthesis of stress-protective factors, such as molecular chaperones. Here, we investigate how the process of phase separation is used by cells to ensure adaptation to stress. We summarize recent findings and propose that the solubility of important translation factors is specifically affected by changes in physical-chemical parameters such temperature or pH and modulated by intrinsically disordered prion-like domains. These stress-triggered changes in protein solubility induce phase separation into condensates that regulate the activity of the translation factors and promote cellular fitness. Prion-like domains play important roles in this process as environmentally regulated stress sensors and modifier sequences that determine protein solubility and phase behavior. We propose that protein phase separation is an evolutionary conserved feature of proteins that cells harness to regulate adaptive stress responses and ensure survival in extreme environmental conditions.
Copyright © 2019 Cold Spring Harbor Laboratory Press; all rights reserved.

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Year:  2019        PMID: 30617047      PMCID: PMC6546044          DOI: 10.1101/cshperspect.a034058

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  118 in total

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Journal:  Mol Biol Cell       Date:  2004-09-15       Impact factor: 4.138

2.  RNAs as chaperones.

Authors:  Scott Horowitz; James C A Bardwell
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3.  Modulation of the Hsp90 chaperone cycle by a stringent client protein.

Authors:  Oliver Robin Lorenz; Lee Freiburger; Daniel Andreas Rutz; Maike Krause; Bettina Karolina Zierer; Sara Alvira; Jorge Cuéllar; José María Valpuesta; Tobias Madl; Michael Sattler; Johannes Buchner
Journal:  Mol Cell       Date:  2014-03-06       Impact factor: 17.970

4.  The yeast poly(A)-binding protein Pab1p stimulates in vitro poly(A)-dependent and cap-dependent translation by distinct mechanisms.

Authors:  L J Otero; M P Ashe; A B Sachs
Journal:  EMBO J       Date:  1999-06-01       Impact factor: 11.598

Review 5.  Prion-like low-complexity sequences: Key regulators of protein solubility and phase behavior.

Authors:  Titus M Franzmann; Simon Alberti
Journal:  J Biol Chem       Date:  2018-06-19       Impact factor: 5.157

6.  Molecular basis of a yeast prion species barrier.

Authors:  A Santoso; P Chien; L Z Osherovich; J S Weissman
Journal:  Cell       Date:  2000-01-21       Impact factor: 41.582

7.  Blessings in disguise: biological benefits of prion-like mechanisms.

Authors:  Gregory A Newby; Susan Lindquist
Journal:  Trends Cell Biol       Date:  2013-02-26       Impact factor: 20.808

8.  Small heat shock proteins sequester misfolding proteins in near-native conformation for cellular protection and efficient refolding.

Authors:  Sophia Ungelenk; Fatemeh Moayed; Chi-Ting Ho; Tomas Grousl; Annette Scharf; Alireza Mashaghi; Sander Tans; Matthias P Mayer; Axel Mogk; Bernd Bukau
Journal:  Nat Commun       Date:  2016-11-30       Impact factor: 14.919

9.  Protein solubility and folding enhancement by interaction with RNA.

Authors:  Seong Il Choi; Kyoung Sim Han; Chul Woo Kim; Ki-Sun Ryu; Byung Hee Kim; Kyun-Hwan Kim; Seo-Il Kim; Tae Hyun Kang; Hang-Cheol Shin; Keo-Heun Lim; Hyo Kyung Kim; Jeong-Min Hyun; Baik L Seong
Journal:  PLoS One       Date:  2008-07-16       Impact factor: 3.240

10.  Glucocorticoid receptor function regulated by coordinated action of the Hsp90 and Hsp70 chaperone cycles.

Authors:  Elaine Kirschke; Devrishi Goswami; Daniel Southworth; Patrick R Griffin; David A Agard
Journal:  Cell       Date:  2014-06-19       Impact factor: 41.582

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  30 in total

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Journal:  EMBO J       Date:  2019-08-20       Impact factor: 11.598

2.  The plant response to heat requires phase separation.

Authors:  Simon Alberti
Journal:  Nature       Date:  2020-09       Impact factor: 49.962

Review 3.  Poly(ADP-Ribosylation) in Age-Related Neurological Disease.

Authors:  Leeanne McGurk; Olivia M Rifai; Nancy M Bonini
Journal:  Trends Genet       Date:  2019-06-07       Impact factor: 11.639

Review 4.  Biomolecular condensates at the nexus of cellular stress, protein aggregation disease and ageing.

Authors:  Simon Alberti; Anthony A Hyman
Journal:  Nat Rev Mol Cell Biol       Date:  2021-01-28       Impact factor: 94.444

5.  The stress granule protein G3BP1 promotes pre-condensation of cGAS to allow rapid responses to DNA.

Authors:  Ming Zhao; Tian Xia; Jia-Qing Xing; Le-Hua Yin; Xiao-Wei Li; Jie Pan; Jia-Yu Liu; Li-Ming Sun; Miao Wang; Tingting Li; Jie Mao; Qiu-Ying Han; Wen Xue; Hong Cai; Kai Wang; Xin Xu; Teng Li; Kun He; Na Wang; Ai-Ling Li; Tao Zhou; Xue-Min Zhang; Wei-Hua Li; Tao Li
Journal:  EMBO Rep       Date:  2021-11-15       Impact factor: 8.807

Review 6.  Melatonin: Regulation of Viral Phase Separation and Epitranscriptomics in Post-Acute Sequelae of COVID-19.

Authors:  Doris Loh; Russel J Reiter
Journal:  Int J Mol Sci       Date:  2022-07-23       Impact factor: 6.208

7.  A comparative meta-analysis of membraneless organelle-associated proteins with age related proteome of C. elegans.

Authors:  Pritam Mukherjee; Prajnadipta Panda; Prasad Kasturi
Journal:  Cell Stress Chaperones       Date:  2022-09-28       Impact factor: 3.827

Review 8.  Insights on Microsatellite Characteristics, Evolution, and Function From the Social Amoeba Dictyostelium discoideum.

Authors:  Felicia N Williams; K Matthew Scaglione
Journal:  Front Neurosci       Date:  2022-06-13       Impact factor: 5.152

9.  Pan-retroviral Nucleocapsid-Mediated Phase Separation Regulates Genomic RNA Positioning and Trafficking.

Authors:  Anne Monette; Meijuan Niu; Lois Chen; Shringar Rao; Robert James Gorelick; Andrew John Mouland
Journal:  Cell Rep       Date:  2020-04-21       Impact factor: 9.423

10.  Filament formation by the translation factor eIF2B regulates protein synthesis in starved cells.

Authors:  Elisabeth Nüske; Guendalina Marini; Doris Richter; Weihua Leng; Aliona Bogdanova; Titus M Franzmann; Gaia Pigino; Simon Alberti
Journal:  Biol Open       Date:  2020-07-08       Impact factor: 2.422

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