Literature DB >> 30611433

Optimal Isotope Labeling of Aromatic Amino Acid Side Chains for NMR Studies of Protein Dynamics.

Ulrich Weininger1.   

Abstract

Aromatic side chains in proteins are often directly evolved in stabilizing the hydrophobic core, protein binding, or enzymatic activity. They are also responsible for specific local dynamic processes, such as histidine tautomerization or ring flips. Despite their importance, they are often not targeted directly by NMR spectroscopy, because of spectroscopic complications and challenges. This chapter addresses state-of-the-art site-selective 13C-labeling methods for aromatic side chains, and describes how they solve several of the spectroscopic issues. A special emphasis is put on thereby enabled protein dynamics experiments of aromatic side chains.
© 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Conformational exchange; Order parameter; Relaxation; Ring flips; Site-selective labeling; Strong couplings

Mesh:

Substances:

Year:  2018        PMID: 30611433     DOI: 10.1016/bs.mie.2018.08.028

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  5 in total

1.  Entropy Hotspots for the Binding of Intrinsically Disordered Ligands to a Receptor Domain.

Authors:  Jie Shi; Qingliang Shen; Jae-Hyun Cho; Wonmuk Hwang
Journal:  Biophys J       Date:  2020-04-08       Impact factor: 4.033

2.  Characterizing Fast Conformational Exchange of Aromatic Rings Using Residual Dipolar Couplings: Distinguishing Jumplike Flips from Other Exchange Mechanisms.

Authors:  Matthias Dreydoppel; Mikael Akke; Ulrich Weininger
Journal:  J Phys Chem B       Date:  2022-09-30       Impact factor: 3.466

3.  1H R relaxation dispersion experiments in aromatic side chains.

Authors:  Matthias Dreydoppel; Roman J Lichtenecker; Mikael Akke; Ulrich Weininger
Journal:  J Biomol NMR       Date:  2021-09-12       Impact factor: 2.835

4.  Site-selective 1H/2H labeling enables artifact-free 1H CPMG relaxation dispersion experiments in aromatic side chains.

Authors:  Heiner N Raum; Julia Schörghuber; Matthias Dreydoppel; Roman J Lichtenecker; Ulrich Weininger
Journal:  J Biomol NMR       Date:  2019-09-10       Impact factor: 2.835

5.  Structural role of essential light chains in the apicomplexan glideosome.

Authors:  Samuel Pazicky; Karthikeyan Dhamotharan; Karol Kaszuba; Haydyn D T Mertens; Tim Gilberger; Dmitri Svergun; Jan Kosinski; Ulrich Weininger; Christian Löw
Journal:  Commun Biol       Date:  2020-10-13
  5 in total

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