Literature DB >> 30608748

Jamming of Deformable Polygons.

Arman Boromand1,2, Alexandra Signoriello3, Fangfu Ye1,4, Corey S O'Hern2,3,5,6, Mark D Shattuck7.   

Abstract

We introduce the deformable particle (DP) model for cells, foams, emulsions, and other soft particulate materials, which adds to the benefits and eliminates deficiencies of existing models. The DP model combines the ability to model individual soft particles with the shape-energy function of the vertex model, and adds arbitrary particle deformations. We focus on 2D deformable polygons with a shape-energy function that is minimized for area a_{0} and perimeter p_{0} and repulsive interparticle forces. We study the onset of jamming versus particle asphericity, A=p_{0}^{2}/4πa_{0}, and find that the packing fraction grows with A until reaching A^{*}=1.16 of the underlying Voronoi cells at confluence. We find that DP packings above and below A^{*} are solidlike, which helps explain the solid-to-fluid transition at A^{*} in the vertex model as a transition from tension- to compression-dominated regimes.

Entities:  

Year:  2018        PMID: 30608748     DOI: 10.1103/PhysRevLett.121.248003

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  11 in total

1.  Void distributions reveal structural link between jammed packings and protein cores.

Authors:  John D Treado; Zhe Mei; Lynne Regan; Corey S O'Hern
Journal:  Phys Rev E       Date:  2019-02       Impact factor: 2.529

2.  Linear and nonlinear mechanical responses can be quite different in models for biological tissues.

Authors:  Preeti Sahu; Janice Kang; Gonca Erdemci-Tandogan; M Lisa Manning
Journal:  Soft Matter       Date:  2020-01-27       Impact factor: 3.679

3.  Compression stiffening of fibrous networks with stiff inclusions.

Authors:  Jordan L Shivers; Jingchen Feng; Anne S G van Oosten; Herbert Levine; Paul A Janmey; Fred C MacKintosh
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-17       Impact factor: 11.205

Review 4.  Generation, Transmission, and Regulation of Mechanical Forces in Embryonic Morphogenesis.

Authors:  Joseph Sutlive; Haning Xiu; Yunfeng Chen; Kun Gou; Fengzhu Xiong; Ming Guo; Zi Chen
Journal:  Small       Date:  2021-11-26       Impact factor: 13.281

5.  Unified multiscale theory of cellular mechanical adaptations to substrate stiffness.

Authors:  Peng-Cheng Chen; Xi-Qiao Feng; Bo Li
Journal:  Biophys J       Date:  2022-08-17       Impact factor: 3.699

6.  Mechanical response of packings of nonspherical particles: A case study of two-dimensional packings of circulo-lines.

Authors:  Jerry Zhang; Kyle VanderWerf; Chengling Li; Shiyun Zhang; Mark D Shattuck; Corey S O'Hern
Journal:  Phys Rev E       Date:  2021-07       Impact factor: 2.707

7.  The structural, vibrational, and mechanical properties of jammed packings of deformable particles in three dimensions.

Authors:  Dong Wang; John D Treado; Arman Boromand; Blake Norwick; Michael P Murrell; Mark D Shattuck; Corey S O'Hern
Journal:  Soft Matter       Date:  2021-11-10       Impact factor: 4.046

8.  Biomechanics of Collective Cell Migration in Cancer Progression: Experimental and Computational Methods.

Authors:  Catalina-Paula Spatarelu; Hao Zhang; Dung Trung Nguyen; Xinyue Han; Ruchuan Liu; Qiaohang Guo; Jacob Notbohm; Jing Fan; Liyu Liu; Zi Chen
Journal:  ACS Biomater Sci Eng       Date:  2019-05-22

9.  Embryonic Tissues as Active Foams.

Authors:  Sangwoo Kim; Marie Pochitaloff; Georgina A Stooke-Vaughan; Otger Campàs
Journal:  Nat Phys       Date:  2021-04-12       Impact factor: 20.034

10.  3D viscoelastic drag forces contribute to cell shape changes during organogenesis in the zebrafish embryo.

Authors:  Paula C Sanematsu; Gonca Erdemci-Tandogan; Himani Patel; Emma M Retzlaff; Jeffrey D Amack; M Lisa Manning
Journal:  Cells Dev       Date:  2021-07-14
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