Literature DB >> 30608225

Chitinophaga silvisoli sp. nov., isolated from forest soil.

Chunling Wang1,2, Yingying Lv2, Anzhang Li2, Guangda Feng2, Gegen Bao1, Honghui Zhu2, Zhiyuan Tan1.   

Abstract

A Gram-stain-negative, rod-shaped and aerobic bacterium, designated K20C18050901T, was isolated from forest soil collected on 11 September 2017 from Dinghushan Biosphere Reserve, Guangdong Province, PR China (23° 10' 24'' N; 112° 32' 10'' E). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain K20C18050901T belongs to the genus Chitinophaga, and showed the highest similarities to Chitinophaga sancti NBRC 15057T (98.6 %) and Chitinophaga oryziterrae JCM 16595T (96.9 %). The major fatty acids (>10 %) were iso-C15 : 0, C16 : 1ω5c, summed feature 3 (C16 : 1ω6c and/or C16 : 1ω7c) and iso-C17 : 0 3-OH. The predominant respiratory quinone was menaquinone-7. The major polar lipid was phosphatidylethanolamine. The draft genome size of strain K20C18050901T was 8.36 Mb with a DNA G+C content of 44.7 mol%. The digital DNA-DNA hybridization and average nucleotide identity values between strain K20C18050901T and C. sancti NBRC 15057T were 31.40 and 85.82 %, respectively. On the basis of phenotypic, genotypic and phylogenetic analysis, strain K20C18050901T represents a novel species of the genus Chitinophaga, for which the name Chitinophagasilvisoli sp. nov. is proposed. The type strain is K20C18050901T (=GDMCC 1.1411T=KCTC 62860T).

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Keywords:  Bacteroidetes; Chitinophaga; phylogenetic tree

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Year:  2019        PMID: 30608225     DOI: 10.1099/ijsem.0.003212

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

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Authors:  Shin Ae Lee; Jun Heo; Tae-Wan Kim; Mee-Kyung Sang; Jaekyeong Song; Soon-Wo Kwon; Hang-Yeon Weon
Journal:  Arch Microbiol       Date:  2020-10-15       Impact factor: 2.552

2.  Bagasse minority pathway expression: Real time study of GH2 β-mannosidases from bacteroidetes.

Authors:  Tatiane Fernanda Leonel; Elisângela Soares Gomes Pepe; Tereza Cristina Luque Castellane; Juliana da Silva Vantini; Michelli Inácio Gonçalves Funnicelli; Eliana Gertrudes de Macedo Lemos
Journal:  PLoS One       Date:  2021-03-17       Impact factor: 3.240

3.  Culture-dependent and -independent methods revealed an abundant myxobacterial community shaped by other bacteria and pH in Dinghushan acidic soils.

Authors:  Chunling Wang; Yingying Lv; Anzhang Li; Qing Yao; Guangda Feng; Honghui Zhu
Journal:  PLoS One       Date:  2020-09-14       Impact factor: 3.240

  3 in total

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