Literature DB >> 30607905

Alarming Situation of Spreading Enteric Viruses Through Sewage Water in Dhaka City: Molecular Epidemiological Evidences.

Sheikh Ariful Hoque1,2, Aksara Thongprachum3,4, Sayaka Takanashi5, Salwa Mohd Mostafa6, Hiroyuki Saito7, Kazi Selim Anwar8, Akiko Nomura3, Sk Azimul Hoque9, Rokeya Begum10, Ummay Nasrin Sultana6, Tania Hossain6, Pattara Khamrin3,11, Shoko Okitsu3,4, Satoshi Hayakawa3, Hiroshi Ushijima3,4.   

Abstract

Global burden of acute viral gastroenteritis remains high, particularly in developing countries including Bangladesh. Sewage water (SW) is an important node to monitor enteric pathogens both in the environment and among the population. Analysis of SW in Dhaka city deems crucially important because a large number of urban-city dwellers live in Dhaka city, the capital of Bangladesh, under a constant threat of precarious sewerage system. In this study, we collected raw SW from five locations of Dhaka city every month from June 2016 to May 2017. It was concentrated with polyethylene glycol (PEG) and investigated for three major enteric viruses, rotavirus A (RVA), norovirus GII (NoV GII) and adenovirus (AdV) using polymerase chain reaction (PCR). Most of these SW samples collected from both hospitals and non-hospital areas yielded enteric viruses: 76% samples were positive for AdV, followed by 53% NoV GII and 38% RVA. Viral load was determined as much as 1 × 107 copies/ml for RVA and 3.5 × 103 copies/ml for NoV GII. Importantly, NoV GII and AdV that can affect people of all ages were predominated during monsoon also when SW overflows and spreads over a wide and crowded area. Genotypes G1, G2, G3, G8, and G9 for RVA, GII.4 for NoV, and type 41 for AdV were detected representing the current profile of circulating genotypes in the population. This study provides the first evidence of distribution of major diarrheal viruses in SW in Dhaka city which is alarming showing grave risk of impending outbreaks through exposure.

Entities:  

Keywords:  Adenovirus; Dhaka; Norovirus GII; Rotavirus A; Sewage

Mesh:

Substances:

Year:  2019        PMID: 30607905     DOI: 10.1007/s12560-018-09363-z

Source DB:  PubMed          Journal:  Food Environ Virol        ISSN: 1867-0334            Impact factor:   2.778


  43 in total

1.  Virological Quality of Irrigation Water in Leafy Green Vegetables and Berry Fruits Production Chains.

Authors:  P Kokkinos; I Kozyra; S Lazic; K Söderberg; P Vasickova; M Bouwknegt; S Rutjes; K Willems; R Moloney; A M de Roda Husman; A Kaupke; E Legaki; M D'Agostino; N Cook; C-H von Bonsdorff; A Rzeżutka; T Petrovic; L Maunula; I Pavlik; A Vantarakis
Journal:  Food Environ Virol       Date:  2016-10-05       Impact factor: 2.778

2.  Species-Specific Identification of Human Adenoviruses in Sewage.

Authors:  Magdalena Wieczorek; Arleta Krzysztoszek; Agnieszka Witek
Journal:  Pol J Microbiol       Date:  2015

Review 3.  Epidemiology of gastroenteritis viruses in Japan: Prevalence, seasonality, and outbreak.

Authors:  Aksara Thongprachum; Pattara Khamrin; Niwat Maneekarn; Satoshi Hayakawa; Hiroshi Ushijima
Journal:  J Med Virol       Date:  2015-09-28       Impact factor: 2.327

4.  Molecular identification and genetic analysis of Norovirus genogroups I and II in water environments: comparative analysis of different reverse transcription-PCR assays.

Authors:  G La Rosa; S Fontana; A Di Grazia; M Iaconelli; M Pourshaban; M Muscillo
Journal:  Appl Environ Microbiol       Date:  2007-05-04       Impact factor: 4.792

5.  Norovirus diarrhea in Bangladesh, 2010-2014: prevalence, clinical features, and genotypes.

Authors:  Mustafizur Rahman; Rajibur Rahman; Shamsun Nahar; Shakhaowat Hossain; Shahnawaz Ahmed; Abu Syed Golam Faruque; Tasnim Azim
Journal:  J Med Virol       Date:  2016-03-29       Impact factor: 2.327

6.  Molecular detection and genetic diversity of norovirus in hospitalized young adults with acute gastroenteritis in Bahia, Brazil.

Authors:  Gubio Soares Campos; Vitor Hugo Moreau; Antonio Bandeira; Goreth Barberino; Paulo Fernando Almeida; David Moraga Amador; Margareth Oliveira de Lima; Silvia Ines Sardi
Journal:  Arch Virol       Date:  2008-04-08       Impact factor: 2.574

7.  Detection and characterization of waterborne gastroenteritis viruses in urban sewage and sewage-polluted river waters in Caracas, Venezuela.

Authors:  J Rodríguez-Díaz; L Querales; L Caraballo; E Vizzi; F Liprandi; H Takiff; W Q Betancourt
Journal:  Appl Environ Microbiol       Date:  2008-11-21       Impact factor: 4.792

8.  An update from hospital-based surveillance for rotavirus gastroenteritis among young children in Bangladesh, July 2012 to June 2017.

Authors:  Syed M Satter; Negar Aliabadi; Paul A Gastañaduy; Warda Haque; Abdullah Mamun; Meerjady S Flora; K Zaman; Mustafizur Rahman; James D Heffelfinger; Stephen P Luby; Emily S Gurley; Umesh D Parashar
Journal:  Vaccine       Date:  2018-05-21       Impact factor: 4.169

Review 9.  Viruses Causing Gastroenteritis: The Known, The New and Those Beyond.

Authors:  Bas B Oude Munnink; Lia van der Hoek
Journal:  Viruses       Date:  2016-02-08       Impact factor: 5.048

10.  Real-time RT-PCR assays to differentiate wild-type group A rotavirus strains from Rotarix(®) and RotaTeq(®) vaccine strains in stool samples.

Authors:  Rashi Gautam; Mathew D Esona; Slavica Mijatovic-Rustempasic; Ka Ian Tam; Jon R Gentsch; Michael D Bowen
Journal:  Hum Vaccin Immunother       Date:  2013-12-16       Impact factor: 3.452

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  3 in total

1.  Role of rotavirus vaccination on G9P[8] rotavirus strain during a seasonal outbreak in Japan.

Authors:  Kimiko Kawata; Sheikh Ariful Hoque; Shuichi Nishimura; Fumihiro Yagyu; Mohammad Tajul Islam; Laila Shamima Sharmin; Ngan Thi Kim Pham; Yuko Onda-Shimizu; Trinh Duy Quang; Sayaka Takanashi; Shoko Okitsu; Pattara Khamrin; Niwat Maneekarn; Satoshi Hayakawa; Hiroshi Ushijima
Journal:  Hum Vaccin Immunother       Date:  2021-05-25       Impact factor: 4.526

2.  Characterization of Norovirus and Other Human Enteric Viruses in Sewage and Stool Samples Through Next-Generation Sequencing.

Authors:  Sofia Strubbia; My V T Phan; Julien Schaeffer; Marion Koopmans; Matthew Cotten; Françoise S Le Guyader
Journal:  Food Environ Virol       Date:  2019-08-24       Impact factor: 2.778

3.  Detection of Rotavirus Strains in Freshwater Clams in Japan.

Authors:  Sheikh Ariful Hoque; Azumi Wakana; Hideaki Shimizu; Sayaka Takanashi; Shoko Okitsu; Kazi Selim Anwar; Satoshi Hayakawa; Niwat Maneekarn; Nobuhiko Okabe; Hiroshi Ushijima
Journal:  Food Environ Virol       Date:  2022-01-03       Impact factor: 4.034

  3 in total

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