| Literature DB >> 30596170 |
Markus Sällman Almén1, Jonas Björk2, Ulf Nyman3, Veronica Lindström4, Magnus Jonsson5, Magnus Abrahamson6, AnnaLotta Schiller Vestergren1, Örjan Lindhe1, Gary Franklin1, Anders Christensson7, Anders Grubb4.
Abstract
INTRODUCTION: Shrunken pore syndrome (SPS), originally defined by cystatin C-based estimated glomerular filtration rate (eGFRcystatin C) being less than 60% of creatinine-based estimated glomerular filtration rate (eGFRcreatinine) in the absence of extrarenal influences on the plasma levels of cystatin C or creatinine, is associated with a high increase in mortality, even in the absence of reduced glomerular filtration rate (GFR). The objective of the present study was to determine whether the proteome of patients with SPS shows differences from that of patients with normal or reduced measured GFR (mGFR) without SPS.Entities:
Keywords: GFR; atherosclerosis; creatinine; cystatin C; kidney; mortality
Year: 2018 PMID: 30596170 PMCID: PMC6308389 DOI: 10.1016/j.ekir.2018.09.002
Source DB: PubMed Journal: Kidney Int Rep ISSN: 2468-0249
Basic characteristics of the 4 cohorts
| Cohort characteristics | SPS mGFR ≥60 ml/min per 1.73 m2 | No SPS mGFR ≥60 ml/min per 1.73 m2 | SPS mGFR <60 ml/min per 1.73 m2 | No SPS mGFR <60 |
|---|---|---|---|---|
| Number of patients | 39 | 39 | 39 | 39 |
| Age, yr | 58 (29, 75) | 57 (23, 82) | 67 (33, 83) | 65 (27, 85) |
| Weight, kg | 73 (46, 127) | 74 (52, 102) | 75 (44, 107) | 79 (53, 99) |
| Body mass index | 24 (17, 37) | 25 (19, 33) | 25 (17, 37) | 27 (20, 32) |
| Females, % | 48.7 | 48.7 | 38.5 | 35.9 |
| mGFR, ml/min per 1.73 m2 | 74 (60, 110) | 83 (62, 112) | 30 (6, 57) | 35 (12, 56) |
| Cystatin C, mg/l | 1.68 | 0.95 (0.77, 1.29) | 3.02 | 2.16 (1.28, 3.96) |
| Creatinine, μmol/l | 59 | 78 (52, 110) | 121 | 162 (94, 410) |
| CAPAcystatin C ml/min per 1.73 m2 | 40 | 80 (55, 109) | 17 | 28 (13, 61) |
| LM-REVcreatinine | 92 | 78 (55, 104) | 38 | 28 (13, 60) |
| CAPAcystatin C / | 0.47 | 1.00 (0.95, 1.05) | 0.40 | 1.00 (0.95, 1.05) |
| All-cause mortality during 5 years, % | 56.4 | 28.2 | 74.4 | 28.2 |
Continuous characteristics are presented as median (2.5−97.5 percentiles); categorical values are presented as percentage (%). Differences between groups were tested using a nonparametric method (Mann-Whitney U test). A p value <0.05 was considered significant. CAPAcystatin C, eGFR using the Caucasian-Asian-Pediatric-Adult equation; LM-REVcreatinine, eGFR using Lund-Malmö-revised equation; mGFR, measured glomerular filtration rate.
Statistical differences between parameters of patients with and without SPS at mGFR ≥ or <60 ml/min per 1.73 m2.
Conversion factor: μmol/l divided by 88.4 = mg/dl.
Both CAPAcystatin C and LM-REVcreatinine can be determined by using the tool available at www.egfr.se.
Proteins for which there were changes in plasma protein levels specific for shrunken pore syndrome (SPS), specific for reduced measured GFR (rGFR), or occurring both in SPS and in rGFR compared to patients with normal measured GFR without SPS
| Protein | Condition | References for atherosclerosis association | Full protein name |
|---|---|---|---|
| MCP-3 | SPS | 38 | Monocyte chemotactic protein–3 |
| CDCP1 | SPS | CUB domain-containing protein 1 | |
| ADAM-TS13 | SPS | 39 | A disintegrin and metalloproteinase with thrombospondin motifs 13 |
| IL-4RA | SPS | Interleukin-4 receptor subunit α | |
| OPG | SPS | 40 | Osteoprotegerin |
| IL-1ra | SPS | 41 | Interleukin-1 receptor antagonist protein |
| IL-6 | SPS | 42, 43 | Interleukin-6 |
| IL-17C | SPS | 44 | Interleukin-17C |
| MCP-1 | SPS | 45 | Monocyte chemoattractant protein–1 |
| CXCL11 | SPS | 46 | C-X-C motif chemokine 11 |
| IL-18 | SPS | 47 | Interleukin-18 |
| FGF-21 | SPS | Fibroblast growth factor 21 | |
| TGFA | SPS | Protransforming growth factor α | |
| CCL19 | SPS | 48 | C-C motif chemokine 19 |
| IL-18R1 | SPS | 49 | Interleukin-18 receptor 1 |
| PD-L1 | SPS | 50 | Programmed cell death 1 ligand 1 |
| HGF | SPS | 51, 52 | Hepatocyte growth factor |
| HO-1 | SPS | Heme oxygenase 1 | |
| IL-10 | SPS | Interleukin-10 | |
| PTX3 | SPS | 53 | Pentraxin 3 |
| CXCL10 | SPS | 46, 54, 55 | C-X-C motif chemokine 10 |
| 4E-BP1 | SPS | 56 | Eukaryotic translation initiation factor 4E-binding protein 1 |
| GDF-2 | SPS | Growth/differentiation factor 2 | |
| MCP-2 | SPS | C-C motif chemokine 8 | |
| CTSL1 | SPS | 57 | Cathepsin L1 |
| CA5A | SPS | Carbonic anhydrase 5A, mitochondrial | |
| CCL20 | SPS | 58, 59 | C-C motif chemokine 20 |
| ADA | SPS | Adenosine deaminase | |
| PARP-1 | SPS | Poly [ADP-ribose] polymerase 1 | |
| HAOX1 | SPS | Hydroxyacid oxidase 1 | |
| VEGF-A | SPS and rGFR | Vascular endothelial growth factor A | |
| ADM | SPS and rGFR | 60 | Adrenomedullin |
| PlGF | SPS and rGFR | 61 | Placenta growth factor |
| TNFRSF10A | SPS and rGFR | Tumor necrosis factor receptor superfamily member 10A | |
| TNFRSF11A | SPS and rGFR | Tumor necrosis factor receptor superfamily member 11A | |
| TRAIL-R2 | SPS and rGFR | 62 | Tumor necrosis factor-related apoptosis-inducing ligand receptor 2 |
| CXCL9 | SPS and rGFR | C-X-C motif chemokine 9 | |
| IL27 | SPS and rGFR | 63 | Interleukin 27 |
| SCF | SPS and rGFR | Kit ligand | |
| SLAMF1 | SPS and rGFR | Signaling lymphocytic activation molecule | |
| LIF-R | SPS and rGFR | Leukemia inhibitory factor receptor | |
| IL-15RA | SPS and rGFR | Interleukin-15 receptor subunit α | |
| IL-10RB | SPS and rGFR | Interleukin-10 receptor subunit β | |
| REN | SPS and rGFR | 64 | Renin |
| MERTK | SPS and rGFR | Tyrosine-protein kinase Mer | |
| TIM | SPS and rGFR | Hepatitis A virus cellular receptor 1 | |
| TM | SPS and rGFR | 65 | Thrombomodulin |
| VSIG2 | SPS and rGFR | V-set and Ig domain-containing protein 2 | |
| IL16 | SPS and rGFR | Pro-interleukin-16 | |
| MMP-10 | SPS and rGFR | 66 | Matrix metalloproteinase 10 |
| CCL23 | SPS and rGFR | 67 | C-C motif chemokine 23 |
| PRSS8 | SPS and rGFR | Prostasin | |
| AGRP | SPS and rGFR | Agouti-related protein | |
| CD40 | SPS and rGFR | 68 | Tumor necrosis factor receptor superfamily member 5 |
| PD-L2 | SPS and rGFR | Programmed cell death 1 ligand 2 | |
| CX3CL1 | SPS and rGFR | 69 | Fractalkine |
| hOSCAR | SPS and rGFR | 70 | Osteoclast-associated Ig-like receptor |
| TNFRSF9 | SPS and rGFR | 71 | Tumor necrosis factor receptor superfamily member 9 |
| CSF-1 | SPS and rGFR | Macrophage colony-stimulating factor 1 | |
| DCN | SPS and rGFR | Decorin | |
| SLAMF7 | SPS and rGFR | SLAM family member 7 | |
| SRC | rGFR | Proto-oncogene tyrosine-protein kinase Src | |
| PRSS27 | rGFR | Serine protease 27 | |
| CST5 | rGFR | Cystatin-D | |
| TF | rGFR | 72 | Tissue factor |
| IL-17D | rGFR | Interleukin-17D | |
| RAGE | rGFR | 73 | Advanced glycosylation end product-specific receptor |
| TNFSF14 | rGFR | Tumor necrosis factor ligand superfamily member 14 | |
| FGF-23 | rGFR | 74, 75 | Fibroblast growth factor 23 |
| SPON2 | rGFR | Spondin-2 | |
| FGF-5 | rGFR | Fibroblast growth factor 5 | |
| β-NGF | rGFR | β-Nerve growth factor | |
| AMBP | rGFR | α-1-Microglobulin/bikunin precursor | |
| IL-12B | rGFR | Interleukin-12 subunit β | |
| PRELP | rGFR | Prolargin | |
| XCL1 | rGFR | Lymphotactin | |
| CD5 | rGFR | T-cell surface glycoprotein CD5 | |
| MMP-7 | rGFR | 76 - 78 | Matrix metalloproteinase-7 |
| LPL | rGFR | 79 | Lipoprotein lipase |
| HB-EGF | rGFR | 80 | Proheparin-binding EGF-like growth factor |
| FABP2 | rGFR | 81 | Fatty acid-binding protein 2 |
| GT | rGFR | Gastrotropin | |
| CASP-8 | rGFR | Caspase-8 | |
| CCL25 | rGFR | 82 | chemokine receptor 9-chemokine ligand 25 |
| TNFRSF13B | rGFR | Tumor necrosis factor receptor superfamily member 13B | |
| LEP | rGFR | 83 | Leptin |
| CD4 | rGFR | T-cell surface glycoprotein CD4 | |
| VEGF-D | rGFR | 84 | Vascular endothelial growth factor D |
Figure 1Protein concentration changes (%) in patients with shrunken pore syndrome (SPS). Changes are relative to the concentrations in patients without SPS and with normal measured glomerular filtration rate (mGFR). Error bars represent 95% confidence intervals for the estimated changes. Protein concentration changes were estimated from the coefficients of a full linear model (n = 154/151; see Supplementary Table S1 for each assay). Full protein names are given in Table 2.
Figure 2Protein concentration changes (%) in patients with reduced mGFR. Changes are relative to the concentrations in patients without shrunken pore syndrome (SPS) and with normal measured glomerular filtration rate (mGFR). Error bars represent 95% confidence intervals for the estimated changes. Protein concentration changes were estimated from the coefficients of a full linear model (n = 154/151; see Supplementary Table S1 for each assay). Full protein names are given in Table 2.
Figure 3Protein concentration changes (%) in patients with both shrunken pore syndrome (SPS) (green) and reduced mGFR (red). Changes are relative to the concentrations in patients without SPS and with normal mGFR. Error bars represent 95% confidence intervals for the estimated changes. Protein concentration changes were estimated from the coefficients of a full linear model (n = 154/151; see Supplementary Table S1 for each assay). Full protein names are given in Table 2.
Figure 4Correlation (P < 0.05) between protein concentration change in patients with shrunken pore syndrome and protein size approximated as molecular mass in Daltons. Protein concentration changes were estimated from the coefficients of a full linear model (n = 154/151; see Supplementary Table S1 for each assay). Only proteins with significant concentration changes were included in the analysis.
Figure 5No correlation (P = 0.29) could be seen between protein concentration change in patients with reduced glomerular filtration rate (GFR) and protein size approximated as molecular mass in Daltons. Protein concentration changes were estimated from the coefficients of a full linear model (n = 154/151; see Supplementary Table S1 for each assay). Only proteins with significant concentration changes were included in the analysis.