Literature DB >> 30592560

Does Intrinsic Disorder in Proteins Favor Their Interaction with Lipids?

Evgenia Deryusheva1, Ekaterina Nemashkalova1, Marie Galloux2, Charels-Adrien Richard2, Jean-François Eléouët2, Denis Kovacs3, Karo Van Belle3, Peter Tompa3,4, Vladimir Uversky1,5, Sergei Permyakov1.   

Abstract

Intrinsically disordered proteins (IDPs) are implicated in a range of human diseases, some of which are associated with the ability to bind to lipids. Although the presence of solvent-exposed hydrophobic regions in IDPs should favor their interactions with low-molecular-weight hydrophobic/amphiphilic compounds, this hypothesis has not been systematically explored as of yet. In this study, the analysis of the DisProt database with regard to the presence of lipid-binding IDPs (LBIDPs) reveals that they comprise, at least, 15% of DisProt entries. LBIDPs are classified into four groups by ligand type, functional categories, domain structure, and conformational state. 57% of LBIDPs are classified as ordered according to the CH-CDF analysis, and 70% of LBIDPs possess lengths of disordered regions below 50%. To investigate the lipid-binding properties of IDPs for which lipid binding is not reported, three proteins from different conformational groups are rationally selected. They all are shown to bind linoleic (LA) and oleic (OA) acids with capacities ranging from 9 to 34 LA/OA molecules per protein molecule. The association with LA/OA causes the formation of high-molecular-weight lipid-protein complexes. These findings suggest that lipid binding is common among IDPs, which can favor their involvement in lipid metabolism.
© 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DisProt database; intrinsically disordered proteins; lipid-binding proteins

Mesh:

Substances:

Year:  2019        PMID: 30592560     DOI: 10.1002/pmic.201800098

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  4 in total

1.  Influence of aminoacyl-tRNA synthetase complex-interacting multifunctional protein 1 on epithelial differentiation and organization during lung development.

Authors:  Daniel D Lee; Alexandra Hochstetler; Eric Sah; Haiming Xu; Chinn-Woan Lowe; Sara Santiaguel; Janet Lea Thornton; Adam Pajakowski; Margaret A Schwarz
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2020-06-24       Impact factor: 5.464

2.  Dynamic reconfiguration of pro-apoptotic BAK on membranes.

Authors:  Jarrod J Sandow; Iris Kl Tan; Alan S Huang; Shashank Masaldan; Jonathan P Bernardini; Ahmad Z Wardak; Richard W Birkinshaw; Robert L Ninnis; Ziyan Liu; Destiny Dalseno; Daisy Lio; Giuseppi Infusini; Peter E Czabotar; Andrew I Webb; Grant Dewson
Journal:  EMBO J       Date:  2021-09-15       Impact factor: 14.012

Review 3.  Intrinsically disordered proteins play diverse roles in cell signaling.

Authors:  Sarah E Bondos; A Keith Dunker; Vladimir N Uversky
Journal:  Cell Commun Signal       Date:  2022-02-17       Impact factor: 5.712

4.  Unsaturated Fatty Acid-Induced Conformational Transitions and Aggregation of the Repeat Domain of Tau.

Authors:  Carlo Giorgio Barracchia; Roberto Tira; Francesca Parolini; Francesca Munari; Luigi Bubacco; Georgios A Spyroulias; Mariapina D'Onofrio; Michael Assfalg
Journal:  Molecules       Date:  2020-06-11       Impact factor: 4.411

  4 in total

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