| Literature DB >> 30592548 |
Paula N Friedman1, Mohammed Shaazuddin1, Li Gong2, Robert L Grossman3, Arthur F Harralson4,5, Teri E Klein6, Norman H Lee5, Doriane C Miller7, Edith A Nutescu8, Travis J O'Brien5, Peter H O'Donnell9, Kevin J O'Leary10, Matthew Tuck11, David O Meltzer12, Minoli A Perera1.
Abstract
The majority of pharmacogenomic (PGx) studies have been conducted on European ancestry populations, thereby excluding minority populations and impeding the discovery and translation of African American-specific genetic variation into precision medicine. Without accounting for variants found in African Americans, clinical recommendations based solely on genetic biomarkers found in European populations could result in misclassification of drug response in African American patients. To address these challenges, we formed the Transdisciplinary Collaborative Center (TCC), African American Cardiovascular Pharmacogenetic Consortium (ACCOuNT), to discover novel genetic variants in African Americans related to clinically actionable cardiovascular phenotypes and to incorporate African American-specific sequence variations into clinical recommendations at the point of care. The TCC consists of two research projects focused on discovery and translation of genetic findings and four cores that support the projects. In addition, the largest repository of PGx information on African Americans is being established as well as lasting infrastructure that can be utilized to spur continued research in this understudied population.Entities:
Year: 2019 PMID: 30592548 PMCID: PMC6510376 DOI: 10.1111/cts.12608
Source DB: PubMed Journal: Clin Transl Sci ISSN: 1752-8054 Impact factor: 4.689
Figure 1The African American Cardiovascular Pharmacogenetic Consortium (ACCOuNT) Transdisciplinary Collaborative Center (TCC). Although both the discovery and translational projects are independent efforts, the overall interactions of these projects within ACCOuNT will help to develop a pipeline from which newly discovered single‐nucleotide polymorphisms (SNPs) in the Discovery Project and SNPs curated via PharmGKB will be investigated within the Translational Project. Data gathered within the Translational Project will inform which drugs are relevant candidates for investigation within the Discovery Project. Results of the Translational Project will be evaluated by the Implementation Advisory Council (IAC), which will collaborate with regional community partners for implementation planning and pilot project development. The ACCOuNT Data Commons will house information generated via the Discovery Project will become a resource for the greater PGx community for discovery and validation of African American findings. All efforts will have oversight of our Community and Stakeholder Advisory Board (CSAB) within the Consortium Core, which has launched community‐based pilot projects. All projects and cores are supported by the infrastructure within the Administrative Core, which provides the foundation of the TCC.
Institutions in the ACCOuNT consortium
| Institution | Key investigators | Expertise | Discovery project | Translational project | Implementation core | Consortium core | Data analysis and harmonization core |
|---|---|---|---|---|---|---|---|
| Northwestern University | Minoli Perera, Kevin O'Leary, Marc Rosenman | Clinical cardiovascular medicine, PGx, statistical genetics | X | X | X | X | |
| The University of Chicago | David Meltzer, Robert Grossman, Peter O'Donnell, Doriane Miller | , health outcomes research in minority populations, bioinformatics, community connections | X | X | X | X | X |
| University of Illinois at Chicago | Edith Nutescu, William Galanter, Shane Borkowski | Clinical cardiovascular medicine, PGx, health outcomes | X | X | |||
| The George Washington University | Travis O'Brien, Norman Lee, April Barbour | Clinical cardiovascular medicine, platelet splicing, PGx | X | ||||
| Shenandoah University | Art Harralson | X | |||||
| Washington DC VA Medical Center | Matthew Tuck | Clinical cardiovascular medicine, PGx | X | ||||
| Stanford University | Teri Klein, Li Gong | , bioinformatics, PharmGKB, biomedical knowledge management | X | X |
ACCOuNT, African American Cardiovascular Pharmacogenetic Consortium.
This table illustrates the variety of scientific organizations in ACCOuNT. Each institution has been chosen for their recognized expertise as well as ongoing collaboration with other investigators in the area.
Inclusion criteria for the discovery study
| Warfarin arm | Clopidogrel arm | NOAC arm |
|---|---|---|
| Both new starts and currently on warfarin | Clopidogrel 75 mg daily | Taking 15 mg/day of rivaroxaban (Xarelto) or taking 5 mg/day of apixaban (Eliquis) or taking 30 mg/day of edoxaban (Savaysa, Lixiana) |
| Expected to remain on warfarin for ≥ 3 months |
Has been on treatment for at least 14 days |
Has been on treatment for at least 3 days |
| Primary indication (at least one): venous thromboembolism, atrial fibrillation, mechanical valve replacement | Primary indication (at least one): history of myocardial infarction, coronary stent placement (drug‐eluting and nondrug‐eluting stents), history of stroke, aspirin intolerance, including hypersensitivity to aspirin or aspirin resistance | Primary indications (at least one): nonvalvular atrial fibrillation, venous thromboembolism treatment, venous thromboembolism prophylaxis |
NOAC, novel oral anticoagulant.
Self‐described as African American.
Age > 18 years.
Starting or on treatment with the selected agents.
Speak and understand English.
Exclusion criteria for the discovery study
| Hemoglobin < 7.0 g/dL at enrollment |
| Life expectancy < 8 weeks |
| Active cancer diagnosis |
| Inability or unwillingness to comply with study procedures or study medications |
| History of significant bleeding (defined as requiring hospitalization) within 6 months prior to enrollment and/or prior to starting anticoagulant or antiplatelet therapy |
| History of any significant gastrointestinal, intracranial, pulmonary, or urogenital bleeding, ongoing peptic ulcer disease or ongoing or acute gastritis, neurospinal disease or spinal surgery (NOAC arm only) within 2 years prior to enrollment or beginning therapy |
| Contraindications to anticoagulant therapy |
| Platelet count < 100,000 mm3 |
| Concurrent or history of alcohol or drug abuse within 1 year prior to enrollment or while on therapy |
| History of hypersensitivity to study drug |
| Concomitant dual antiplatelet therapy daily (however, patients may be on low‐dose aspirin) or daily NSAIDs |
NOAC, novel oral anticoagulant; NSAIDs, nonsteroidal anti‐inflammatory drugs.
Figure 2Translational Project Study Schemas. Overall scheme of planned recruitment within the Translational Project. (a) The hospitalized African American cohort, which will receive Genomic Prescribing System (GPS)‐guided therapy on their next readmission, (b) shows the randomization of African American patients newly started on warfarin who will either receive pharmacogenomics (PGx)‐based therapy or standard of care with assessment of outcome collect 3 months after dose initiation.^Via GPS; *Includes phone follow‐up at 14 and 28 days after warfarin initiation if patient is already discharged, plus medical record review (including International Normalized Ratios (INRs)) for the first 3 months; time within range will include allowance for variability by (±) 0.2 for the INR to be counted within range; #physicians and pharmacists are permitted to seek standard available decision support/guidance/dosing algorithms if they wish, but specific guidance from this study will be unavailable.