Literature DB >> 30590585

The Fraction of Rhinovirus Detections Attributable to Mild and Severe Respiratory Illness in a Setting of High Human Immunodeficiency Virus Prevalence, South Africa, 2013-2015.

Orienka Hellferscee1,2, Florette K Treurnicht1, Sibongile Walaza1,3, Mignon Du Plessis1, Anne Von Gottberg1,2, Nicole Wolter1,2, Jocelyn Moyes1,3, Halima Dawood4,5, Ebrahim Variava6,7,8, Marthi Pretorius1,9, Marietjie Venter1,10, Cheryl Cohen1,3, Stefano Tempia1,11,12.   

Abstract

BACKGROUND: The association of rhinovirus (RV) detection to illness is poorly understood.
METHODS: We enrolled case patients hospitalized with severe respiratory illness (SRI) at 2 hospitals and outpatients with influenza-like illness (ILI) and asymptomatic individuals (controls) from 2 affiliated clinics during 2013-2015. We compared the RV prevalence among ILI and SRI cases to those of controls stratified by human immunodeficiency virus (HIV) serostatus using penalized logistic regression. The attributable fraction (AF) was calculated.
RESULTS: During 2013-2015, RV was detected in 17.4% (368/2120), 26.8% (979/3654), and 23.0% (1003/4360) of controls, ILI cases, and SRI cases, respectively. The RV AF (95% confidence interval) was statistically significant among children aged <5 years (ILI: 44.6% [30.7%-55.7%] and SRI: 50.3% [38.6%-59.9%]; P < .001) and individuals aged ≥5 years (ILI: 62.9% [54.4%-69.8%] and SRI: 51.3% [38.7%-61.3%]; P < .001) as well as among HIV-infected (ILI: 59.9% [45.8%-70.3%] and SRI: 39.8% [22.3%-53.3%]; P < .001) and HIV-uninfected (ILI: 53.6% [44.7%-61.1%] and SRI: 55.3% [45.6%-63.2%]; P < .001) individuals.
CONCLUSIONS: Although RV detection was common among controls, it was also associated with a substantial proportion of clinical illness across age groups, irrespective of HIV status.
© The Author(s) 2018. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  attributable fraction; influenza-like illness; rhinovirus; severe respiratory illness

Mesh:

Year:  2019        PMID: 30590585      PMCID: PMC7804373          DOI: 10.1093/infdis/jiy725

Source DB:  PubMed          Journal:  J Infect Dis        ISSN: 0022-1899            Impact factor:   5.226


  20 in total

1.  High detection frequency and viral loads of human rhinovirus species A to C in fecal samples; diagnostic and clinical implications.

Authors:  H Harvala; C L McIntyre; N J McLeish; J Kondracka; J Palmer; P Molyneaux; R Gunson; S Bennett; K Templeton; P Simmonds
Journal:  J Med Virol       Date:  2012-03       Impact factor: 2.327

2.  Clinical severity of pediatric respiratory illness with enterovirus D68 compared with rhinovirus or other enterovirus genotypes.

Authors:  Dominik Mertz; Abdulsalam Alawfi; Jeffrey M Pernica; Candy Rutherford; Kathy Luinstra; Marek Smieja
Journal:  CMAJ       Date:  2015-10-13       Impact factor: 8.262

3.  Penalized regression for genome-wide association screening of sequence data.

Authors:  H Zhou; D H Alexander; M E Sehl; J S Sinsheimer; E M Sobel; K Lange
Journal:  Pac Symp Biocomput       Date:  2011

4.  Respiratory viral coinfections identified by a 10-plex real-time reverse-transcription polymerase chain reaction assay in patients hospitalized with severe acute respiratory illness--South Africa, 2009-2010.

Authors:  Marthi A Pretorius; Shabir A Madhi; Cheryl Cohen; Dhamari Naidoo; Michelle Groome; Jocelyn Moyes; Amelia Buys; Sibongile Walaza; Halima Dawood; Meera Chhagan; Sumayya Haffjee; Kathleen Kahn; Adrian Puren; Marietjie Venter
Journal:  J Infect Dis       Date:  2012-12-15       Impact factor: 5.226

5.  Human rhinovirus infections in rural Thailand: epidemiological evidence for rhinovirus as both pathogen and bystander.

Authors:  Alicia M Fry; Xiaoyan Lu; Sonja J Olsen; Malinee Chittaganpitch; Pongpun Sawatwong; Somrak Chantra; Henry C Baggett; Dean Erdman
Journal:  PLoS One       Date:  2011-03-29       Impact factor: 3.240

6.  A preliminary study of pneumonia etiology among hospitalized children in Kenya.

Authors:  Laura L Hammitt; Sidi Kazungu; Susan C Morpeth; Dustin G Gibson; Benedict Mvera; Andrew J Brent; Salim Mwarumba; Clayton O Onyango; Anne Bett; Donald O Akech; David R Murdoch; D James Nokes; J Anthony G Scott
Journal:  Clin Infect Dis       Date:  2012-04       Impact factor: 9.079

7.  Severe acute respiratory infection in children in a densely populated urban slum in Kenya, 2007-2011.

Authors:  Robert F Breiman; Leonard Cosmas; M Njenga; John Williamson; Joshua A Mott; Mark A Katz; Dean D Erdman; Eileen Schneider; M Oberste; John C Neatherlin; Henry Njuguna; Daniel M Ondari; Kennedy Odero; George O Okoth; Beatrice Olack; Newton Wamola; Joel M Montgomery; Barry S Fields; Daniel R Feikin
Journal:  BMC Infect Dis       Date:  2015-02-25       Impact factor: 3.090

8.  Attributable Fraction of Influenza Virus Detection to Mild and Severe Respiratory Illnesses in HIV-Infected and HIV-Uninfected Patients, South Africa, 2012-2016.

Authors:  Stefano Tempia; Sibongile Walaza; Jocelyn Moyes; Adam L Cohen; Claire von Mollendorf; Meredith L McMorrow; Florette K Treurnicht; Marietjie Venter; Marthi Pretorius; Orienka Hellferscee; Nicole Wolter; Anne von Gottberg; Athermon Nguweneza; Johanna M McAnerney; Halima Dawood; Ebrahim Variava; Shabir A Madhi; Cheryl Cohen
Journal:  Emerg Infect Dis       Date:  2017-07       Impact factor: 6.883

9.  Viral respiratory infections in hospitalized and community control children in Alaska.

Authors:  Rosalyn J Singleton; Lisa R Bulkow; Karen Miernyk; Carolynn DeByle; Lori Pruitt; Kimberlee Boyd Hummel; Dana Bruden; Janet A Englund; Larry J Anderson; Lynne Lucher; Robert C Holman; Thomas W Hennessy
Journal:  J Med Virol       Date:  2010-07       Impact factor: 2.327

10.  Genetic diversity and molecular epidemiology of human rhinoviruses in South Africa.

Authors:  Marthi A Pretorius; Stefano Tempia; Florette K Treurnicht; Sibongile Walaza; Adam L Cohen; Jocelyn Moyes; Orienka Hellferscee; Ebrahim Variava; Halima Dawood; Meera Chhagan; Sumayya Haffjee; Shabir A Madhi; Cheryl Cohen; Marietjie Venter
Journal:  Influenza Other Respir Viruses       Date:  2014-07-03       Impact factor: 4.380

View more
  1 in total

1.  The national burden of influenza-like illness and severe respiratory illness overall and associated with nine respiratory viruses in South Africa, 2013-2015.

Authors:  Stefano Tempia; Jocelyn Moyes; Adam L Cohen; Sibongile Walaza; Meredith L McMorrow; Florette K Treurnicht; Orienka Hellferscee; Nicole Wolter; Anne von Gottberg; Halima Dawood; Ebrahim Variava; Cheryl Cohen
Journal:  Influenza Other Respir Viruses       Date:  2022-02-11       Impact factor: 4.380

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.