| Literature DB >> 30581271 |
María Rojas-Feria1, Teresa Romero-García1, Jose Ángel Fernández Caballero-Rico2, Helena Pastor Ramírez3, Marta Avilés-Recio1, Manuel Castro-Fernandez1, Natalia Chueca Porcuna2, Manuel Romero-Gόmez3, Federico García2, Lourdes Grande1, José A Del Campo4.
Abstract
BACKGROUND: The gut microbiota plays a key role in the maintenance of intestinal homeostasis and the development and activation of the host immune system. It has been shown that commensal bacterial species can regulate the expression of host genes. 16S rRNA gene sequencing has shown that the microbiota in inflammatory bowel disease (IBD) is abnormal and characterized by reduced diversity. MicroRNAs (miRNAs) have been explored as biomarkers and therapeutic targets, since they are able to regulate specific genes associated with Crohn's disease (CD). In this work, we aim to investigate the composition of gut microbiota of active treatment-naïve adult CD patients, with miRNA profile from gut microbiota. AIM: To investigate the composition of gut microbiota of active treatment-naïve adult CD patients, with miRNA profile from gut microbiota.Entities:
Keywords: Bacteroidetes; Crohn’s disease; Dysbiosis; Firmicutes; microRNAs
Mesh:
Substances:
Year: 2018 PMID: 30581271 PMCID: PMC6295834 DOI: 10.3748/wjg.v24.i46.5223
Source DB: PubMed Journal: World J Gastroenterol ISSN: 1007-9327 Impact factor: 5.742
Figure 1Ecological and metagenomic analysis. A: Number of readings for each sample using the 16S massive sequencing technique in GS Junior. See methods section for details. B: Principal components analysis. The control samples and Crohn’s disease are observed in well-defined groups. The data was selected with the Ribosomal Project database using a maximum e-value of 10-5, a minimum identity of 75%, and a minimum length alignment of 15 bp. PC: Principal components; CD: Crohn’s disease sample.
Figure 2Box plot showing a significant difference in the Clostridia class between control group (blue) and Crohn’ disease (green).
Figure 3Bar graph with the mean of each group (Crohn’s disease and control population) and family taxon (95% confidence level).
Figure 4Bar chart with the mean of each taxonomic group (gender) according to group (control vs Crohn’s disease) and differences with 95% confidence level.
Figure 5Functional analysis of the microbiota. Significant differences (P < 0.05) in biosynthesis and glycan metabolism, carbohydrate metabolism, lipid metabolism, catabolism, digestive system, amino acid metabolism and immune system were found. C: Control sample; CD: Crohn’s disease sample.
Figure 6Three microRNAs were found increased in samples from patients with Crohn’s disease. Individual microRNA levels in 10 patients with Crohn’s disease are represented. miRNA: MicroRNA.