Literature DB >> 30578407

Conformational selection turns on phenylalanine hydroxylase.

Kirill A Konovalov1, Wei Wang1, Xuhui Huang2.   

Abstract

Phenylalanine hydroxylase catalyzes a critical step in the phenylalanine catabolic pathway, and impairment of the human enzyme is linked to phenylketonuria. Phenylalanine is also a positive allosteric regulator of the enzyme, and the allosteric binding site has been determined by crystallography. However, the allosteric activation mechanism remains unclear. Using large-scale simulations to explore how phenylalanine binds to the regulatory site, Ge et al. discovered gating motions of the protein that suggest a conformational selection mechanism.
© 2018 Konovalov et al.

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Year:  2018        PMID: 30578407      PMCID: PMC6314130          DOI: 10.1074/jbc.H118.006676

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  8 in total

Review 1.  Folding funnels, binding funnels, and protein function.

Authors:  C J Tsai; S Kumar; B Ma; R Nussinov
Journal:  Protein Sci       Date:  1999-06       Impact factor: 6.725

2.  Application of a Theory of Enzyme Specificity to Protein Synthesis.

Authors:  D E Koshland
Journal:  Proc Natl Acad Sci U S A       Date:  1958-02       Impact factor: 11.205

3.  Enzymatic detoxication, conformational selection, and the role of molten globule active sites.

Authors:  Matthew T Honaker; Mauro Acchione; Wei Zhang; Bengt Mannervik; William M Atkins
Journal:  J Biol Chem       Date:  2013-05-06       Impact factor: 5.157

4.  Both protein dynamics and ligand concentration can shift the binding mechanism between conformational selection and induced fit.

Authors:  Nicholas Greives; Huan-Xiang Zhou
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-30       Impact factor: 11.205

5.  Simulations of the regulatory ACT domain of human phenylalanine hydroxylase (PAH) unveil its mechanism of phenylalanine binding.

Authors:  Yunhui Ge; Elias Borne; Shannon Stewart; Michael R Hansen; Emilia C Arturo; Eileen K Jaffe; Vincent A Voelz
Journal:  J Biol Chem       Date:  2018-10-04       Impact factor: 5.157

6.  A role for both conformational selection and induced fit in ligand binding by the LAO protein.

Authors:  Daniel-Adriano Silva; Gregory R Bowman; Alejandro Sosa-Peinado; Xuhui Huang
Journal:  PLoS Comput Biol       Date:  2011-05-26       Impact factor: 4.475

7.  Structural features of the regulatory ACT domain of phenylalanine hydroxylase.

Authors:  Carla Carluccio; Franca Fraternali; Francesco Salvatore; Arianna Fornili; Adriana Zagari
Journal:  PLoS One       Date:  2013-11-14       Impact factor: 3.240

8.  Structural basis for ligand-dependent dimerization of phenylalanine hydroxylase regulatory domain.

Authors:  Dipali Patel; Jolanta Kopec; Fiona Fitzpatrick; Thomas J McCorvie; Wyatt W Yue
Journal:  Sci Rep       Date:  2016-04-06       Impact factor: 4.379

  8 in total
  1 in total

1.  Chiral fluorescent sensor based on H8-BINOL for the high enantioselective recognition of d- and l-phenylalanine.

Authors:  Yafeng Zhang; Huizhen Wang; Hu Yu; Xiaoxia Sun
Journal:  RSC Adv       Date:  2022-04-19       Impact factor: 4.036

  1 in total

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