Literature DB >> 30576850

Efficacy of different dynamic functional connectivity methods to capture cognitively relevant information.

Hua Xie1, Charles Y Zheng2, Daniel A Handwerker3, Peter A Bandettini4, Vince D Calhoun5, Sunanda Mitra6, Javier Gonzalez-Castillo3.   

Abstract

Given the dynamic nature of the human brain, there has been an increasing interest in investigating short-term temporal changes in functional connectivity, also known as dynamic functional connectivity (dFC), i.e., the time-varying inter-regional statistical dependence of blood oxygenation level-dependent (BOLD) signal within the constraints of a single scan. Numerous methodologies have been proposed to characterize dFC during rest and task, but few studies have compared them in terms of their efficacy to capture behavioral and clinically relevant dynamics. This is mostly due to lack of a well-defined ground truth, especially for rest scans. In this study, with a multitask dataset (rest, memory, video, and math) serving as ground truth, we investigated the efficacy of several dFC estimation techniques at capturing cognitively relevant dFC modulation induced by external tasks. We evaluated two framewise methods (dFC estimates for a single time point): dynamic conditional correlation (DCC) and jackknife correlation (JC); and five window-based methods: sliding window correlation (SWC), sliding window correlation with L1-regularization (SWC_L1), a combination of DCC and SWC called moving average DCC (DCC_MA), multiplication of temporal derivatives (MTD), and a variant of jackknife correlation called delete-d jackknife correlation (dJC). The efficacy is defined as each dFC metric's ability to successfully subdivide multitask scans into cognitively homogenous segments (even if those segments are not temporally continuous). We found that all window-based dFC methods performed well for commonly used window lengths (WL ≥ 30sec), with sliding window methods (SWC, SWC_L1) as well as the hybrid DCC_MA approach performing slightly better. For shorter window lengths (WL ≤ 15sec), DCC_MA and dJC produced the best results. Neither framewise method (i.e., DCC and JC) led to dFC estimates with high accuracy.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Cognitive information; Dynamic conditional correlation; Dynamic functional connectivity; Jackknife correlation; Multiplication of temporal derivatives; Sliding window correlation

Mesh:

Year:  2018        PMID: 30576850      PMCID: PMC6401299          DOI: 10.1016/j.neuroimage.2018.12.037

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  10 in total

1.  Spontaneous and deliberate modes of creativity: Multitask eigen-connectivity analysis captures latent cognitive modes during creative thinking.

Authors:  Hua Xie; Roger E Beaty; Sahar Jahanikia; Caleb Geniesse; Neeraj S Sonalkar; Manish Saggar
Journal:  Neuroimage       Date:  2021-08-29       Impact factor: 6.556

2.  Visualizing temporal brain-state changes for fMRI using t-distributed stochastic neighbor embedding.

Authors:  Harshit Parmar; Brian Nutter; Rodney Long; Sameer Antani; Sunanda Mitra
Journal:  J Med Imaging (Bellingham)       Date:  2021-08-16

3.  An average sliding window correlation method for dynamic functional connectivity.

Authors:  Victor M Vergara; Anees Abrol; Vince D Calhoun
Journal:  Hum Brain Mapp       Date:  2019-01-19       Impact factor: 5.038

4.  Comparison of Resting-State Functional MRI Methods for Characterizing Brain Dynamics.

Authors:  Eric Maltbie; Behnaz Yousefi; Xiaodi Zhang; Amrit Kashyap; Shella Keilholz
Journal:  Front Neural Circuits       Date:  2022-04-04       Impact factor: 3.342

5.  Manifold Learning of Dynamic Functional Connectivity Reliably Identifies Functionally Consistent Coupling Patterns in Human Brains.

Authors:  Yuyuan Yang; Lubin Wang; Yu Lei; Yuyang Zhu; Hui Shen
Journal:  Brain Sci       Date:  2019-11-04

6.  Multiple spatial scale mapping of time-resolved brain network reconfiguration during evoked pain in patients with rheumatoid arthritis.

Authors:  Silvia Fanton; Reem Altawil; Isabel Ellerbrock; Jon Lampa; Eva Kosek; Peter Fransson; William H Thompson
Journal:  Front Neurosci       Date:  2022-08-09       Impact factor: 5.152

7.  Covariance Shrinkage for Dynamic Functional Connectivity.

Authors:  Nicolas Honnorat; Ehsan Adeli; Qingyu Zhao; Adolf Pfefferbaum; Edith V Sullivan; Kilian Pohl
Journal:  Connect Neuroimaging (2019)       Date:  2019-10-10

8.  Dynamic functional connectivity between nucleus accumbens and the central executive network relates to chronic cannabis use.

Authors:  Hye Bin Yoo; Blake Edward Moya; Francesca M Filbey
Journal:  Hum Brain Mapp       Date:  2020-05-20       Impact factor: 5.038

9.  Dynamic neural circuit disruptions associated with antisocial behaviors.

Authors:  Weixiong Jiang; Han Zhang; Ling-Li Zeng; Hui Shen; Jian Qin; Kim-Han Thung; Pew-Thian Yap; Huasheng Liu; Dewen Hu; Wei Wang; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2020-10-16       Impact factor: 5.399

Review 10.  Questions and controversies in the study of time-varying functional connectivity in resting fMRI.

Authors:  Daniel J Lurie; Daniel Kessler; Danielle S Bassett; Richard F Betzel; Michael Breakspear; Shella Kheilholz; Aaron Kucyi; Raphaël Liégeois; Martin A Lindquist; Anthony Randal McIntosh; Russell A Poldrack; James M Shine; William Hedley Thompson; Natalia Z Bielczyk; Linda Douw; Dominik Kraft; Robyn L Miller; Muthuraman Muthuraman; Lorenzo Pasquini; Adeel Razi; Diego Vidaurre; Hua Xie; Vince D Calhoun
Journal:  Netw Neurosci       Date:  2020-02-01
  10 in total

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