Literature DB >> 30576073

DNA barcoding fishes from the Congo and the Lower Guinean provinces: Assembling a reference library for poorly inventoried fauna.

Gontran Sonet1, Jos Snoeks2,3, Zoltán T Nagy1, Emmanuel Vreven2, Gert Boden2, Floris C Breman2,4, Eva Decru2, Mark Hanssens2, Armel Ibala Zamba5, Kurt Jordaens2,6, Victor Mamonekene5, Tobias Musschoot2, Jeroen Van Houdt7, Maarten Van Steenberge1,2,3, Soleil Lunkayilakio Wamuini8,9, Erik Verheyen1,6.   

Abstract

The Congolese and Lower Guinean ichthyological provinces are understudied hotspots of the global fish diversity. Here, we barcoded 741 specimens from the Lower and Middle Congo River and from three major drainage basins of the Lower Guinean ichthyological province, Kouilou-Niari, Nyanga and Ogowe. We identified 194 morphospecies belonging to 82 genera and 25 families. Most morphospecies (92.8%) corresponded to distinct clusters of DNA barcodes. Of the four morphospecies present in both neighbouring ichthyological provinces, only one showed DNA barcode divergence <2.5%. A small fraction of the fishes barcoded here (12.9% of the morphospecies and 16.1% of the barcode clusters representing putative species) were also barcoded in a previous large-scale DNA analysis of freshwater fishes of the Lower Congo published in 2011 (191 specimens, 102 morphospecies). We compared species assignments before and after taxonomic updates and across studies performed by independent research teams and observed that most cases of inconsistent species assignments were due to unknown diversity (undescribed species and unknown intraspecific variation). Our results report more than 17 putative new species and show that DNA barcode data provide a measure of genetic variability that facilitates the inventory of underexplored ichthyofaunae. However, taxonomic scrutiny, associated with revisions and new species descriptions, is indispensable to delimit species and build a coherent reference library.
© 2018 John Wiley & Sons Ltd.

Entities:  

Keywords:  COI; Central Africa; biodiversity; freshwater; ichthyofauna; taxonomy

Mesh:

Year:  2019        PMID: 30576073     DOI: 10.1111/1755-0998.12983

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  5 in total

1.  DNA barcoding identification of Greek freshwater fishes.

Authors:  Alexandros Tsoupas; Sofia Papavasileiou; Styliani Minoudi; Konstantinos Gkagkavouzis; Olga Petriki; Dimitra Bobori; Argyrios Sapounidis; Emmanouil Koutrakis; Ioannis Leonardos; Nikoleta Karaiskou; Alexandros Triantafyllidis
Journal:  PLoS One       Date:  2022-01-26       Impact factor: 3.240

2.  Diversity investigation by application of DNA barcoding: A case study of lepidopteran insects in Xinjiang wild fruit forests, China.

Authors:  Jinyu Zhan; Yufeng Zheng; Qing Xia; Jin Wang; Sibo Liu; Zhaofu Yang
Journal:  Ecol Evol       Date:  2022-03-07       Impact factor: 2.912

3.  SPEDE-sampler: An R Shiny application to assess how methodological choices and taxon sampling can affect Generalized Mixed Yule Coalescent output and interpretation.

Authors:  Clarke J M van Steenderen; Guy F Sutton
Journal:  Mol Ecol Resour       Date:  2022-02-16       Impact factor: 8.678

4.  Large-scale DNA barcoding of the subfamily Culterinae (Cypriniformes: Xenocyprididae) in East Asia unveils a geographical scale effect, taxonomic warnings and cryptic diversity.

Authors:  Weitao Chen; Nicolas Hubert; Yuefei Li; Denggao Xiang; Xingwei Cai; Shuli Zhu; Jiping Yang; Chuanjiang Zhou; Xinhui Li; Jie Li
Journal:  Mol Ecol       Date:  2022-06-12       Impact factor: 6.622

5.  Terrestrial contributions to Afrotropical aquatic food webs: The Congo River case.

Authors:  David X Soto; Eva Decru; Jos Snoeks; Erik Verheyen; Lora Van de Walle; Jolien Bamps; Taylor Mambo; Steven Bouillon
Journal:  Ecol Evol       Date:  2019-08-27       Impact factor: 2.912

  5 in total

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