Literature DB >> 30573519

Early Noninvasive Detection of Response to Targeted Therapy in Non-Small Cell Lung Cancer.

Jillian Phallen1, Alessandro Leal1, Brian D Woodward2, Patrick M Forde1, Jarushka Naidoo1, Kristen A Marrone1, Julie R Brahmer1, Jacob Fiksel1, Jamie E Medina1, Stephen Cristiano1, Doreen N Palsgrove1, Christopher D Gocke1, Daniel C Bruhm1, Parissa Keshavarzian2, Vilmos Adleff1, Elizabeth Weihe2, Valsamo Anagnostou1, Robert B Scharpf1, Victor E Velculescu3, Hatim Husain4.   

Abstract

With the advent of precision oncology, there is an urgent need to develop improved methods for rapidly detecting responses to targeted therapies. Here, we have developed an ultrasensitive measure of cell-free tumor load using targeted and whole-genome sequencing approaches to assess responses to tyrosine kinase inhibitors in patients with advanced lung cancer. Analyses of 28 patients treated with anti-EGFR or HER2 therapies revealed a bimodal distribution of cell-free circulating tumor DNA (ctDNA) after therapy initiation, with molecular responders having nearly complete elimination of ctDNA (>98%). Molecular nonresponders displayed limited changes in ctDNA levels posttreatment and experienced significantly shorter progression-free survival (median 1.6 vs. 13.7 months, P < 0.0001; HR = 66.6; 95% confidence interval, 13.0-341.7), which was detected on average 4 weeks earlier than CT imaging. ctDNA analyses of patients with radiographic stable or nonmeasurable disease improved prediction of clinical outcome compared with CT imaging. These analyses provide a rapid approach for evaluating therapeutic response to targeted therapies and have important implications for the management of patients with cancer and the development of new therapeutics.Significance: Cell-free tumor load provides a novel approach for evaluating longitudinal changes in ctDNA during systemic treatment with tyrosine kinase inhibitors and serves an unmet clinical need for real-time, noninvasive detection of tumor response to targeted therapies before radiographic assessment.See related commentary by Zou and Meyerson, p. 1038. ©2018 American Association for Cancer Research.

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Year:  2018        PMID: 30573519      PMCID: PMC6481620          DOI: 10.1158/0008-5472.CAN-18-1082

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  38 in total

1.  Personalized genomic analyses for cancer mutation discovery and interpretation.

Authors:  Siân Jones; Valsamo Anagnostou; Karli Lytle; Sonya Parpart-Li; Monica Nesselbush; David R Riley; Manish Shukla; Bryan Chesnick; Maura Kadan; Eniko Papp; Kevin G Galens; Derek Murphy; Theresa Zhang; Lisa Kann; Mark Sausen; Samuel V Angiuoli; Luis A Diaz; Victor E Velculescu
Journal:  Sci Transl Med       Date:  2015-04-15       Impact factor: 17.956

2.  Erlotinib in previously treated non-small-cell lung cancer.

Authors:  Frances A Shepherd; José Rodrigues Pereira; Tudor Ciuleanu; Eng Huat Tan; Vera Hirsh; Sumitra Thongprasert; Daniel Campos; Savitree Maoleekoonpiroj; Michael Smylie; Renato Martins; Maximiliano van Kooten; Mircea Dediu; Brian Findlay; Dongsheng Tu; Dianne Johnston; Andrea Bezjak; Gary Clark; Pedro Santabárbara; Lesley Seymour
Journal:  N Engl J Med       Date:  2005-07-14       Impact factor: 91.245

3.  Direct detection of early-stage cancers using circulating tumor DNA.

Authors:  Jillian Phallen; Mark Sausen; Vilmos Adleff; Alessandro Leal; Carolyn Hruban; James White; Valsamo Anagnostou; Jacob Fiksel; Stephen Cristiano; Eniko Papp; Savannah Speir; Thomas Reinert; Mai-Britt Worm Orntoft; Brian D Woodward; Derek Murphy; Sonya Parpart-Li; David Riley; Monica Nesselbush; Naomi Sengamalay; Andrew Georgiadis; Qing Kay Li; Mogens Rørbæk Madsen; Frank Viborg Mortensen; Joost Huiskens; Cornelis Punt; Nicole van Grieken; Remond Fijneman; Gerrit Meijer; Hatim Husain; Robert B Scharpf; Luis A Diaz; Siân Jones; Sam Angiuoli; Torben Ørntoft; Hans Jørgen Nielsen; Claus Lindbjerg Andersen; Victor E Velculescu
Journal:  Sci Transl Med       Date:  2017-08-16       Impact factor: 17.956

4.  Detection of circulating tumor DNA in early- and late-stage human malignancies.

Authors:  Chetan Bettegowda; Mark Sausen; Rebecca J Leary; Isaac Kinde; Yuxuan Wang; Nishant Agrawal; Bjarne R Bartlett; Hao Wang; Brandon Luber; Rhoda M Alani; Emmanuel S Antonarakis; Nilofer S Azad; Alberto Bardelli; Henry Brem; John L Cameron; Clarence C Lee; Leslie A Fecher; Gary L Gallia; Peter Gibbs; Dung Le; Robert L Giuntoli; Michael Goggins; Michael D Hogarty; Matthias Holdhoff; Seung-Mo Hong; Yuchen Jiao; Hartmut H Juhl; Jenny J Kim; Giulia Siravegna; Daniel A Laheru; Calogero Lauricella; Michael Lim; Evan J Lipson; Suely Kazue Nagahashi Marie; George J Netto; Kelly S Oliner; Alessandro Olivi; Louise Olsson; Gregory J Riggins; Andrea Sartore-Bianchi; Kerstin Schmidt; le-Ming Shih; Sueli Mieko Oba-Shinjo; Salvatore Siena; Dan Theodorescu; Jeanne Tie; Timothy T Harkins; Silvio Veronese; Tian-Li Wang; Jon D Weingart; Christopher L Wolfgang; Laura D Wood; Dongmei Xing; Ralph H Hruban; Jian Wu; Peter J Allen; C Max Schmidt; Michael A Choti; Victor E Velculescu; Kenneth W Kinzler; Bert Vogelstein; Nickolas Papadopoulos; Luis A Diaz
Journal:  Sci Transl Med       Date:  2014-02-19       Impact factor: 17.956

5.  Analysis of circulating tumor DNA to monitor metastatic breast cancer.

Authors:  Sarah-Jane Dawson; Dana W Y Tsui; Muhammed Murtaza; Heather Biggs; Oscar M Rueda; Suet-Feung Chin; Mark J Dunning; Davina Gale; Tim Forshew; Betania Mahler-Araujo; Sabrina Rajan; Sean Humphray; Jennifer Becq; David Halsall; Matthew Wallis; David Bentley; Carlos Caldas; Nitzan Rosenfeld
Journal:  N Engl J Med       Date:  2013-03-13       Impact factor: 91.245

6.  Mutational analysis of therapy-related myelodysplastic syndromes and acute myelogenous leukemia.

Authors:  Alan H Shih; Stephen S Chung; Emily K Dolezal; Su-Jiang Zhang; Omar I Abdel-Wahab; Christopher Y Park; Stephen D Nimer; Ross L Levine; Virginia M Klimek
Journal:  Haematologica       Date:  2013-01-24       Impact factor: 9.941

7.  Bias-Corrected Targeted Next-Generation Sequencing for Rapid, Multiplexed Detection of Actionable Alterations in Cell-Free DNA from Advanced Lung Cancer Patients.

Authors:  Cloud P Paweletz; Adrian G Sacher; Chris K Raymond; Ryan S Alden; Allison O'Connell; Stacy L Mach; Yanan Kuang; Leena Gandhi; Paul Kirschmeier; Jessie M English; Lee P Lim; Pasi A Jänne; Geoffrey R Oxnard
Journal:  Clin Cancer Res       Date:  2015-10-12       Impact factor: 12.531

8.  Base-Position Error Rate Analysis of Next-Generation Sequencing Applied to Circulating Tumor DNA in Non-Small Cell Lung Cancer: A Prospective Study.

Authors:  Nicolas Pécuchet; Eleonora Zonta; Audrey Didelot; Pierre Combe; Constance Thibault; Laure Gibault; Camille Lours; Yves Rozenholc; Valérie Taly; Pierre Laurent-Puig; Hélène Blons; Elizabeth Fabre
Journal:  PLoS Med       Date:  2016-12-27       Impact factor: 11.069

9.  Osimertinib or Platinum-Pemetrexed in EGFR T790M-Positive Lung Cancer.

Authors:  Tony S Mok; Yi-Long Wu; Myung-Ju Ahn; Marina C Garassino; Hye R Kim; Suresh S Ramalingam; Frances A Shepherd; Yong He; Hiroaki Akamatsu; Willemijn S M E Theelen; Chee K Lee; Martin Sebastian; Alison Templeton; Helen Mann; Marcelo Marotti; Serban Ghiorghiu; Vassiliki A Papadimitrakopoulou
Journal:  N Engl J Med       Date:  2016-12-06       Impact factor: 91.245

10.  An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage.

Authors:  Aaron M Newman; Scott V Bratman; Jacqueline To; Jacob F Wynne; Neville C W Eclov; Leslie A Modlin; Chih Long Liu; Joel W Neal; Heather A Wakelee; Robert E Merritt; Joseph B Shrager; Billy W Loo; Ash A Alizadeh; Maximilian Diehn
Journal:  Nat Med       Date:  2014-04-06       Impact factor: 53.440

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  26 in total

1.  Circulating tumor DNA and plasma microsatellite instability during PD-1 blockade.

Authors:  Pashtoon M Kasi
Journal:  J Gastrointest Oncol       Date:  2020-08

2.  Comparison of liquid-based to tissue-based biopsy analysis by targeted next generation sequencing in advanced non-small cell lung cancer: a comprehensive systematic review.

Authors:  Stepan M Esagian; Georgia Ι Grigoriadou; Ilias P Nikas; Vasileios Boikou; Peter M Sadow; Jae-Kyung Won; Konstantinos P Economopoulos
Journal:  J Cancer Res Clin Oncol       Date:  2020-05-27       Impact factor: 4.553

3.  Noninvasive Detection of Microsatellite Instability and High Tumor Mutation Burden in Cancer Patients Treated with PD-1 Blockade.

Authors:  Andrew Georgiadis; Jennifer N Durham; Laurel A Keefer; Bjarne R Bartlett; Magdalena Zielonka; Derek Murphy; James R White; Steve Lu; Ellen L Verner; Finey Ruan; David Riley; Robert A Anders; Erika Gedvilaite; Sam Angiuoli; Siân Jones; Victor E Velculescu; Dung T Le; Luis A Diaz; Mark Sausen
Journal:  Clin Cancer Res       Date:  2019-09-10       Impact factor: 12.531

4.  Circulating Tumor DNA Provides a Sneak Peek into Treatment Responses in Non-Small Cell Lung Cancer.

Authors:  Tao Zou; Matthew Meyerson
Journal:  Cancer Res       Date:  2019-03-15       Impact factor: 13.312

5.  Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples.

Authors:  Matthew H Bailey; William U Meyerson; Lewis Jonathan Dursi; Liang-Bo Wang; Guanlan Dong; Wen-Wei Liang; Amila Weerasinghe; Shantao Li; Yize Li; Sean Kelso; Gordon Saksena; Kyle Ellrott; Michael C Wendl; David A Wheeler; Gad Getz; Jared T Simpson; Mark B Gerstein; Li Ding
Journal:  Nat Commun       Date:  2020-09-21       Impact factor: 14.919

6.  Genotype-Specific Differences in Circulating Tumor DNA Levels in Advanced NSCLC.

Authors:  Vincent K Lam; Jianjun Zhang; Carol C Wu; Hai T Tran; Lerong Li; Lixia Diao; Jing Wang; Waree Rinsurongkawong; Victoria M Raymond; Richard B Lanman; Jeff Lewis; Emily B Roarty; Jack Roth; Stephen Swisher; J Jack Lee; Don L Gibbons; Vassiliki A Papadimitrakopoulou; John V Heymach
Journal:  J Thorac Oncol       Date:  2020-12-31       Impact factor: 15.609

7.  Tumor fraction-guided cell-free DNA profiling in metastatic solid tumor patients.

Authors:  Dana W Y Tsui; Michael L Cheng; Maha Shady; Julie L Yang; Dennis Stephens; Helen Won; Preethi Srinivasan; Kety Huberman; Fanli Meng; Xiaohong Jing; Juber Patel; Maysun Hasan; Ian Johnson; Erika Gedvilaite; Brian Houck-Loomis; Nicholas D Socci; S Duygu Selcuklu; Venkatraman E Seshan; Hongxin Zhang; Debyani Chakravarty; Ahmet Zehir; Ryma Benayed; Maria Arcila; Marc Ladanyi; Samuel A Funt; Darren R Feldman; Bob T Li; Pedram Razavi; Jonathan Rosenberg; Dean Bajorin; Gopa Iyer; Wassim Abida; Howard I Scher; Dana Rathkopf; Agnes Viale; Michael F Berger; David B Solit
Journal:  Genome Med       Date:  2021-05-31       Impact factor: 11.117

8.  Serial Monitoring of Circulating Tumor DNA by Next-Generation Gene Sequencing as a Biomarker of Response and Survival in Patients With Advanced NSCLC Receiving Pembrolizumab-Based Therapy.

Authors:  Jeffrey C Thompson; Erica L Carpenter; Benjamin A Silva; Jamie Rosenstein; Austin L Chien; Katie Quinn; Carin R Espenschied; Allysia Mak; Lesli A Kiedrowski; Martina Lefterova; Rebecca J Nagy; Sharyn I Katz; Stephanie S Yee; Taylor A Black; Aditi P Singh; Christine A Ciunci; Joshua M Bauml; Roger B Cohen; Corey J Langer; Charu Aggarwal
Journal:  JCO Precis Oncol       Date:  2021-03-19

9.  Plasma-based longitudinal mutation monitoring as a potential predictor of disease progression in subjects with adenocarcinoma in advanced non-small cell lung cancer.

Authors:  John Jiang; Hans-Peter Adams; Maria Lange; Sandra Siemann; Mirjam Feldkamp; Sylvie McNamara; Sebastian Froehler; Stephanie J Yaung; Lijing Yao; Aarthi Balasubramanyam; Nalin Tikoo; Christine Ju; H Jost Achenbach; Rainer Krügel; John F Palma
Journal:  BMC Cancer       Date:  2020-09-15       Impact factor: 4.430

10.  The molecular tumor burden index as a response evaluation criterion in breast cancer.

Authors:  Zongbi Yi; Fei Ma; Guohua Rong; Binliang Liu; Yanfang Guan; Jin Li; Xiaoying Sun; Wenna Wang; Xiuwen Guan; Hongnan Mo; Jiani Wang; Haili Qian; Binghe Xu
Journal:  Signal Transduct Target Ther       Date:  2021-07-07
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