Literature DB >> 30570648

Visualizing Deep Learning Models for the Detection of Referable Diabetic Retinopathy and Glaucoma.

Stuart Keel1, Jinrong Wu1, Pei Ying Lee1, Jane Scheetz1, Mingguang He1,2.   

Abstract

Importance: Convolutional neural networks have recently been applied to ophthalmic diseases; however, the rationale for the outputs generated by these systems is inscrutable to clinicians. A visualization tool is needed that would enable clinicians to understand important exposure variables in real time. Objective: To systematically visualize the convolutional neural networks of 2 validated deep learning models for the detection of referable diabetic retinopathy (DR) and glaucomatous optic neuropathy (GON). Design, Setting, and Participants: The GON and referable DR algorithms were previously developed and validated (holdout method) using 48 116 and 66 790 retinal photographs, respectively, derived from a third-party database (LabelMe) of deidentified photographs from various clinical settings in China. In the present cross-sectional study, a random sample of 100 true-positive photographs and all false-positive cases from each of the GON and DR validation data sets were selected. All data were collected from March to June 2017. The original color fundus images were processed using an adaptive kernel visualization technique. The images were preprocessed by applying a sliding window with a size of 28 × 28 pixels and a stride of 3 pixels to crop images into smaller subimages to produce a feature map. Threshold scales were adjusted to optimal levels for each model to generate heat maps highlighting localized landmarks on the input image. A single optometrist allocated each image to predefined categories based on the generated heat map. Main Outcomes and Measures: Visualization regions of the fundus.
Results: In the GON data set, 90 of 100 true-positive cases (90%; 95% CI, 82%-95%) and 15 of 22 false-positive cases (68%; 95% CI, 45%-86%) displayed heat map visualization within regions of the optic nerve head only. Lesions typically seen in cases of referable DR (exudate, hemorrhage, or vessel abnormality) were identified as the most important prognostic regions in 96 of 100 true-positive DR cases (96%; 95% CI, 90%-99%). In 39 of 46 false-positive DR cases (85%; 95% CI, 71%-94%), the heat map displayed visualization of nontraditional fundus regions with or without retinal venules. Conclusions and Relevance: These findings suggest that this visualization method can highlight traditional regions in disease diagnosis, substantiating the validity of the deep learning models investigated. This visualization technique may promote the clinical adoption of these models.

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Mesh:

Year:  2019        PMID: 30570648      PMCID: PMC6440231          DOI: 10.1001/jamaophthalmol.2018.6035

Source DB:  PubMed          Journal:  JAMA Ophthalmol        ISSN: 2168-6165            Impact factor:   7.389


  10 in total

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2.  Integrating holistic and local deep features for glaucoma classification.

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Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2016-08

3.  Development and Validation of a Deep Learning Algorithm for Detection of Diabetic Retinopathy in Retinal Fundus Photographs.

Authors:  Varun Gulshan; Lily Peng; Marc Coram; Martin C Stumpe; Derek Wu; Arunachalam Narayanaswamy; Subhashini Venugopalan; Kasumi Widner; Tom Madams; Jorge Cuadros; Ramasamy Kim; Rajiv Raman; Philip C Nelson; Jessica L Mega; Dale R Webster
Journal:  JAMA       Date:  2016-12-13       Impact factor: 56.272

4.  Pattern of glaucomatous neuroretinal rim loss.

Authors:  J B Jonas; M C Fernández; J Stürmer
Journal:  Ophthalmology       Date:  1993-01       Impact factor: 12.079

5.  Development and Validation of a Deep Learning System for Diabetic Retinopathy and Related Eye Diseases Using Retinal Images From Multiethnic Populations With Diabetes.

Authors:  Daniel Shu Wei Ting; Carol Yim-Lui Cheung; Gilbert Lim; Gavin Siew Wei Tan; Nguyen D Quang; Alfred Gan; Haslina Hamzah; Renata Garcia-Franco; Ian Yew San Yeo; Shu Yen Lee; Edmund Yick Mun Wong; Charumathi Sabanayagam; Mani Baskaran; Farah Ibrahim; Ngiap Chuan Tan; Eric A Finkelstein; Ecosse L Lamoureux; Ian Y Wong; Neil M Bressler; Sobha Sivaprasad; Rohit Varma; Jost B Jonas; Ming Guang He; Ching-Yu Cheng; Gemmy Chui Ming Cheung; Tin Aung; Wynne Hsu; Mong Li Lee; Tien Yin Wong
Journal:  JAMA       Date:  2017-12-12       Impact factor: 56.272

6.  Efficacy of a Deep Learning System for Detecting Glaucomatous Optic Neuropathy Based on Color Fundus Photographs.

Authors:  Zhixi Li; Yifan He; Stuart Keel; Wei Meng; Robert T Chang; Mingguang He
Journal:  Ophthalmology       Date:  2018-03-02       Impact factor: 12.079

7.  Glaucoma diagnostic ability of quadrant and clock-hour neuroretinal rim assessment using cirrus HD optical coherence tomography.

Authors:  Young Hoon Hwang; Yong Yeon Kim
Journal:  Invest Ophthalmol Vis Sci       Date:  2012-04-24       Impact factor: 4.799

8.  Automated Identification of Diabetic Retinopathy Using Deep Learning.

Authors:  Rishab Gargeya; Theodore Leng
Journal:  Ophthalmology       Date:  2017-03-27       Impact factor: 12.079

9.  Improved Automated Detection of Diabetic Retinopathy on a Publicly Available Dataset Through Integration of Deep Learning.

Authors:  Michael David Abràmoff; Yiyue Lou; Ali Erginay; Warren Clarida; Ryan Amelon; James C Folk; Meindert Niemeijer
Journal:  Invest Ophthalmol Vis Sci       Date:  2016-10-01       Impact factor: 4.799

10.  Feasibility and patient acceptability of a novel artificial intelligence-based screening model for diabetic retinopathy at endocrinology outpatient services: a pilot study.

Authors:  Stuart Keel; Pei Ying Lee; Jane Scheetz; Zhixi Li; Mark A Kotowicz; Richard J MacIsaac; Mingguang He
Journal:  Sci Rep       Date:  2018-03-12       Impact factor: 4.379

  10 in total
  18 in total

1.  Artificial Intelligence Screening for Diabetic Retinopathy: the Real-World Emerging Application.

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Journal:  Curr Diab Rep       Date:  2019-07-31       Impact factor: 4.810

2.  Deep learning-based automated detection of glaucomatous optic neuropathy on color fundus photographs.

Authors:  Feng Li; Lei Yan; Yuguang Wang; Jianxun Shi; Hua Chen; Xuedian Zhang; Minshan Jiang; Zhizheng Wu; Kaiqian Zhou
Journal:  Graefes Arch Clin Exp Ophthalmol       Date:  2020-01-27       Impact factor: 3.117

3.  Automatic detection of leakage point in central serous chorioretinopathy of fundus fluorescein angiography based on time sequence deep learning.

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4.  A deep learning system for identifying lattice degeneration and retinal breaks using ultra-widefield fundus images.

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Journal:  Ann Transl Med       Date:  2019-11

5.  Untangling Computer-Aided Diagnostic System for Screening Diabetic Retinopathy Based on Deep Learning Techniques.

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6.  Automated detection of retinal exudates and drusen in ultra-widefield fundus images based on deep learning.

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Review 7.  Application of machine learning in ophthalmic imaging modalities.

Authors:  Yan Tong; Wei Lu; Yue Yu; Yin Shen
Journal:  Eye Vis (Lond)       Date:  2020-04-16

Review 8.  Different fundus imaging modalities and technical factors in AI screening for diabetic retinopathy: a review.

Authors:  Gilbert Lim; Valentina Bellemo; Yuchen Xie; Xin Q Lee; Michelle Y T Yip; Daniel S W Ting
Journal:  Eye Vis (Lond)       Date:  2020-04-14

9.  A Retrospective Comparison of Deep Learning to Manual Annotations for Optic Disc and Optic Cup Segmentation in Fundus Photographs.

Authors:  Huazhu Fu; Fei Li; Yanwu Xu; Jingan Liao; Jian Xiong; Jianbing Shen; Jiang Liu; Xiulan Zhang
Journal:  Transl Vis Sci Technol       Date:  2020-06-24       Impact factor: 3.283

10.  Deep learning for identification of peripheral retinal degeneration using ultra-wide-field fundus images: is it sufficient for clinical translation?

Authors:  Tien-En Tan; Daniel Shu Wei Ting; Tien Yin Wong; Dawn A Sim
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