Literature DB >> 30565879

One-to-one registration of en-face optical coherence tomography attenuation coefficients with histology of a prostatectomy specimen.

Abel Swaan1,2, Berrend G Muller1, Leah S Wilk2, Mitra Almasian2, Rob A A van Kollenburg1, Evita Zwartkruis3, L Rence Rozendaal3, Daniel M de Bruin1,2, Dirk J Faber2, Ton G van Leeuwen2, Marcel B van Herk2,4.   

Abstract

Optical coherence tomography (OCT), enables high-resolution 3D imaging of the morphology of light scattering tissues. From the OCT signal, parameters can be extracted and related to tissue structures. One of the quantitative parameters is the attenuation coefficient; the rate at which the intensity of detected light decays in depth. To couple the quantitative parameters with the histology one-to-one registration is needed. The primary aim of this study is to validate a registration method of quantitative OCT parameters to histological tissue outcome through one-to-one registration of OCT with histology. We matched OCT images of unstained fixated prostate tissue slices with corresponding histology slides, wherein different histologic types were demarcated. Attenuation coefficients were determined by a supervised automated exponential fit (corrected for point spread function and sensitivity roll-off related signal losses) over a depth of 0.32 mm starting from 0.10 mm below the automatically detected tissue edge. Finally, the attenuation coefficients corresponding to the different tissue types of the prostate were compared. From the attenuation coefficients, we produced the squared relative residue and goodness-of-fit metric R2 . This article explains the method to perform supervised automated quantitative analysis of OCT data, and the one-to-one registration of OCT extracted quantitative data with histopathological outcomes.
© 2018 The Authors. Journal of Biophotonics published by WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Keywords:  histopathology; one-to-one registration; optical coherence tomography; prostate

Mesh:

Year:  2018        PMID: 30565879     DOI: 10.1002/jbio.201800274

Source DB:  PubMed          Journal:  J Biophotonics        ISSN: 1864-063X            Impact factor:   3.207


  5 in total

1.  Characterizing thrombus with multiple red blood cell compositions by optical coherence tomography attenuation coefficient.

Authors:  Hsiao-Chuan Liu; Mehdi Abbasi; Yong Hong Ding; Eric C Polley; Seán Fitzgerald; Ramanathan Kadirvel; David F Kallmes; Waleed Brinjikji; Matthew W Urban
Journal:  J Biophotonics       Date:  2020-12-17       Impact factor: 3.207

2.  Angular compounding for speckle reduction in optical coherence tomography using geometric image registration algorithm and digital focusing.

Authors:  Jingjing Zhao; Yonatan Winetraub; Edwin Yuan; Warren H Chan; Sumaira Z Aasi; Kavita Y Sarin; Orr Zohar; Adam de la Zerda
Journal:  Sci Rep       Date:  2020-02-05       Impact factor: 4.379

3.  Optical coherence tomography holds promise to transform the diagnostic anatomic pathology gross evaluation process.

Authors:  Diana Mojahed; Matthew Applegate; Hua Guo; Bret Taback; Richard Ha; Hanina Hibshoosh; Christine Hendon
Journal:  J Biomed Opt       Date:  2022-09       Impact factor: 3.758

Review 4.  Parametric imaging of attenuation by optical coherence tomography: review of models, methods, and clinical translation.

Authors:  Peijun Gong; Mitra Almasian; Gijs van Soest; Daniel de Bruin; Ton van Leeuwen; David Sampson; Dirk Faber
Journal:  J Biomed Opt       Date:  2020-04       Impact factor: 3.170

5.  Review of methods and applications of attenuation coefficient measurements with optical coherence tomography.

Authors:  Shuang Chang; Audrey K Bowden
Journal:  J Biomed Opt       Date:  2019-09       Impact factor: 3.170

  5 in total

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