Literature DB >> 30559426

Metalloprotein switches that display chemical-dependent electron transfer in cells.

Joshua T Atkinson1, Ian J Campbell2, Emily E Thomas2, Sheila C Bonitatibus3, Sean J Elliott3, George N Bennett4,5, Jonathan J Silberg6,7.   

Abstract

Biological electron transfer is challenging to directly regulate using environmental conditions. To enable dynamic, protein-level control over energy flow in metabolic systems for synthetic biology and bioelectronics, we created ferredoxin logic gates that utilize transcriptional and post-translational inputs to control energy flow through a synthetic electron transfer pathway that is required for bacterial growth. These logic gates were created by subjecting a thermostable, plant-type ferredoxin to backbone fission and fusing the resulting fragments to a pair of proteins that self-associate, a pair of proteins whose association is stabilized by a small molecule, and to the termini of a ligand-binding domain. We show that the latter domain insertion design strategy yields an allosteric ferredoxin switch that acquires an oxygen-tolerant [2Fe-2S] cluster and can use different chemicals, including a therapeutic drug and an environmental pollutant, to control the production of a reduced metabolite in Escherichia coli and cell lysates.

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Year:  2018        PMID: 30559426      PMCID: PMC6898983          DOI: 10.1038/s41589-018-0192-3

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  43 in total

1.  Solution structure of FKBP, a rotamase enzyme and receptor for FK506 and rapamycin.

Authors:  S W Michnick; M K Rosen; T J Wandless; M Karplus; S L Schreiber
Journal:  Science       Date:  1991-05-10       Impact factor: 47.728

2.  Evolution of the structure of ferredoxin based on living relics of primitive amino Acid sequences.

Authors:  R V Eck; M O Dayhoff
Journal:  Science       Date:  1966-04-15       Impact factor: 47.728

3.  Oligomerization domain-directed reassembly of active dihydrofolate reductase from rationally designed fragments.

Authors:  J N Pelletier; F X Campbell-Valois; S W Michnick
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-13       Impact factor: 11.205

4.  Photosynthetic electron partitioning between [FeFe]-hydrogenase and ferredoxin:NADP+-oxidoreductase (FNR) enzymes in vitro.

Authors:  Iftach Yacoby; Sergii Pochekailov; Hila Toporik; Maria L Ghirardi; Paul W King; Shuguang Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-23       Impact factor: 11.205

5.  Structural and mutational studies of an electron transfer complex of maize sulfite reductase and ferredoxin.

Authors:  Ju Yaen Kim; Masato Nakayama; Hiroshi Toyota; Genji Kurisu; Toshiharu Hase
Journal:  J Biochem       Date:  2016-02-26       Impact factor: 3.387

6.  An arsenic-specific biosensor with genetically engineered Shewanella oneidensis in a bioelectrochemical system.

Authors:  Dylan P Webster; Michaela A TerAvest; Devin F R Doud; Arun Chakravorty; Eric C Holmes; Caleb M Radens; Swati Sureka; Jeffrey A Gralnick; Largus T Angenent
Journal:  Biosens Bioelectron       Date:  2014-07-08       Impact factor: 10.618

7.  Evolutionary history of redox metal-binding domains across the tree of life.

Authors:  Arye Harel; Yana Bromberg; Paul G Falkowski; Debashish Bhattacharya
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-28       Impact factor: 11.205

Review 8.  Alternative FeS cluster ligands: tuning redox potentials and chemistry.

Authors:  Daniel W Bak; Sean J Elliott
Journal:  Curr Opin Chem Biol       Date:  2014-01-22       Impact factor: 8.822

9.  The structural basis of estrogen receptor/coactivator recognition and the antagonism of this interaction by tamoxifen.

Authors:  A K Shiau; D Barstad; P M Loria; L Cheng; P J Kushner; D A Agard; G L Greene
Journal:  Cell       Date:  1998-12-23       Impact factor: 41.582

10.  Interplay of SpkG kinase and the Slr0151 protein in the phosphorylation of ferredoxin 5 in Synechocystis sp. strain PCC 6803.

Authors:  Martina Angeleri; Anna Zorina; Eva-Mari Aro; Natalia Battchikova
Journal:  FEBS Lett       Date:  2018-02-01       Impact factor: 4.124

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  5 in total

1.  De novo design of symmetric ferredoxins that shuttle electrons in vivo.

Authors:  Andrew C Mutter; Alexei M Tyryshkin; Ian J Campbell; Saroj Poudel; George N Bennett; Jonathan J Silberg; Vikas Nanda; Paul G Falkowski
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-01       Impact factor: 11.205

2.  Prochlorococcus phage ferredoxin: structural characterization and electron transfer to cyanobacterial sulfite reductases.

Authors:  Ian J Campbell; Jose Luis Olmos; Weijun Xu; Dimithree Kahanda; Joshua T Atkinson; Othneil Noble Sparks; Mitchell D Miller; George N Phillips; George N Bennett; Jonathan J Silberg
Journal:  J Biol Chem       Date:  2020-05-19       Impact factor: 5.157

3.  Bioelectrochemical systems and synthetic biology: more power, more products.

Authors:  Sarah M Glaven
Journal:  Microb Biotechnol       Date:  2019-07-01       Impact factor: 5.813

Review 4.  Towards a Synthetic Biology Toolset for Metallocluster Enzymes in Biosynthetic Pathways: What We Know and What We Need.

Authors:  Helena Shomar; Gregory Bokinsky
Journal:  Molecules       Date:  2021-11-17       Impact factor: 4.411

5.  Evolutionary Relationships Between Low Potential Ferredoxin and Flavodoxin Electron Carriers.

Authors:  Ian J Campbell; George N Bennett; Jonathan J Silberg
Journal:  Front Energy Res       Date:  2019-08-23
  5 in total

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