Literature DB >> 30557683

Construct validity of six sentiment analysis methods in the text of encounter notes of patients with critical illness.

Gary E Weissman1, Lyle H Ungar2, Michael O Harhay3, Katherine R Courtright4, Scott D Halpern5.   

Abstract

Sentiment analysis may offer insights into patient outcomes through the subjective expressions made by clinicians in the text of encounter notes. We analyzed the predictive, concurrent, convergent, and content validity of six sentiment methods in a sample of 793,725 multidisciplinary clinical notes among 41,283 hospitalizations associated with an intensive care unit stay. None of these approaches improved early prediction of in-hospital mortality using logistic regression models, but did improve both discrimination and calibration when using random forests. Additionally, positive sentiment measured by the CoreNLP (OR 0.04, 95% CI 0.002-0.55), Pattern (OR 0.09, 95% CI 0.04-0.17), sentimentr (OR 0.37, 95% CI 0.25-0.63), and Opinion (OR 0.25, 95% CI 0.07-0.89) methods were inversely associated with death on the concurrent day after adjustment for demographic characteristics and illness severity. Median daily lexical coverage ranged from 5.4% to 20.1%. While sentiment between all methods was positively correlated, their agreement was weak. Sentiment analysis holds promise for clinical applications but will require a novel domain-specific method applicable to clinical text.
Copyright © 2018. Published by Elsevier Inc.

Entities:  

Keywords:  Attitude of health personnel; Critical care; Electronic health records; Forecasting; Natural language processing

Year:  2018        PMID: 30557683      PMCID: PMC6342660          DOI: 10.1016/j.jbi.2018.12.001

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  31 in total

1.  Principles and methods of validity and reliability testing of questionnaires used in social and health science researches.

Authors:  Oladimeji Akeem Bolarinwa
Journal:  Niger Postgrad Med J       Date:  2015 Oct-Dec

Review 2.  Mortality predictions in the intensive care unit: comparing physicians with scoring systems.

Authors:  Tasnim Sinuff; Neill K J Adhikari; Deborah J Cook; Holger J Schünemann; Lauren E Griffith; Graeme Rocker; Stephen D Walter
Journal:  Crit Care Med       Date:  2006-03       Impact factor: 7.598

3.  A modification of the Elixhauser comorbidity measures into a point system for hospital death using administrative data.

Authors:  Carl van Walraven; Peter C Austin; Alison Jennings; Hude Quan; Alan J Forster
Journal:  Med Care       Date:  2009-06       Impact factor: 2.983

4.  Sentiment analysis in medical settings: New opportunities and challenges.

Authors:  Kerstin Denecke; Yihan Deng
Journal:  Artif Intell Med       Date:  2015-05-01       Impact factor: 5.326

5.  Efficient and sparse feature selection for biomedical text classification via the elastic net: Application to ICU risk stratification from nursing notes.

Authors:  Ben J Marafino; W John Boscardin; R Adams Dudley
Journal:  J Biomed Inform       Date:  2015-02-17       Impact factor: 6.317

6.  Sample size estimation in diagnostic test studies of biomedical informatics.

Authors:  Karimollah Hajian-Tilaki
Journal:  J Biomed Inform       Date:  2014-02-26       Impact factor: 6.317

7.  Big data and new knowledge in medicine: the thinking, training, and tools needed for a learning health system.

Authors:  Harlan M Krumholz
Journal:  Health Aff (Millwood)       Date:  2014-07       Impact factor: 6.301

8.  Risk stratification of ICU patients using topic models inferred from unstructured progress notes.

Authors:  Li-wei Lehman; Mohammed Saeed; William Long; Joon Lee; Roger Mark
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03

9.  Sentiment Analysis of Suicide Notes: A Shared Task.

Authors:  John P Pestian; Pawel Matykiewicz; Michelle Linn-Gust; Brett South; Ozlem Uzuner; Jan Wiebe; K Bretonnel Cohen; John Hurdle; Christopher Brew
Journal:  Biomed Inform Insights       Date:  2012-01-30

10.  Sentiment Measured in Hospital Discharge Notes Is Associated with Readmission and Mortality Risk: An Electronic Health Record Study.

Authors:  Thomas H McCoy; Victor M Castro; Andrew Cagan; Ashlee M Roberson; Isaac S Kohane; Roy H Perlis
Journal:  PLoS One       Date:  2015-08-24       Impact factor: 3.240

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  7 in total

Review 1.  A scoping review of ethics considerations in clinical natural language processing.

Authors:  Oliver J Bear Don't Walk; Harry Reyes Nieva; Sandra Soo-Jin Lee; Noémie Elhadad
Journal:  JAMIA Open       Date:  2022-05-26

2.  Validating GAN-BioBERT: A Methodology for Assessing Reporting Trends in Clinical Trials.

Authors:  Joshua J Myszewski; Emily Klossowski; Patrick Meyer; Kristin Bevil; Lisa Klesius; Kristopher M Schroeder
Journal:  Front Digit Health       Date:  2022-05-24

Review 3.  Resuscitation after global brain ischemia-anoxia.

Authors:  P Safar; A Bleyaert; E M Nemoto; J Moossy; J V Snyder
Journal:  Crit Care Med       Date:  1978 Jul-Aug       Impact factor: 9.296

4.  A Year of Papers Using Biomedical Texts: Findings from the Section on Natural Language Processing of the IMIA Yearbook.

Authors:  Natalia Grabar; Cyril Grouin
Journal:  Yearb Med Inform       Date:  2019-08-16

5.  The promise of open survey questions-The validation of text-based job satisfaction measures.

Authors:  Indy Wijngaards; Martijn Burger; Job van Exel
Journal:  PLoS One       Date:  2019-12-26       Impact factor: 3.240

6.  "Broadcast your gender." A comparison of four text-based classification methods of German YouTube channels.

Authors:  Lena Seewann; Roland Verwiebe; Claudia Buder; Nina-Sophie Fritsch
Journal:  Front Big Data       Date:  2022-09-14

7.  Sentiment Analysis Based on the Nursing Notes on In-Hospital 28-Day Mortality of Sepsis Patients Utilizing the MIMIC-III Database.

Authors:  Qiaoyan Gao; Dandan Wang; Pingping Sun; Xiaorong Luan; Wenfeng Wang
Journal:  Comput Math Methods Med       Date:  2021-10-13       Impact factor: 2.238

  7 in total

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