Literature DB >> 30550880

Peptide antibiotic trichogin in model membranes: Self-association and capture of fatty acids.

Ekaterina F Afanasyeva1, Victoria N Syryamina1, Marta De Zotti2, Fernando Formaggio3, Claudio Toniolo3, Sergei A Dzuba4.   

Abstract

The antimicrobial action of peptides in bacterial membranes is commonly related to their mode of self-assembling which results in pore formation. To optimize peptide antibiotic use for therapeutic purposes, a study on the concentration dependence of self-assembling process is thus desirable. In this work, we investigate this dependence for peptaibol trichogin GA IV (Tric) in the 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) model membrane in the range of peptide concentrations between 0.5 and 3.3 mol%. Pulsed double electron-electron resonance (PELDOR) applied on spin-labeled peptide analogs highlights the onset of peptide dimerization above a critical peptide concentration value, namely ~ 2 mol%. Electron spin echo (ESE) envelope modulation (ESEEM) for D2O-hydrated bilayers shows that dimerization is accompanied by peptide re-orientation towards a trans-membrane disposition. For spin-labeled stearic acids (5-DSA) in POPC bilayers, the study of ESE decays and ESEEM in the presence of a deuterated peptide analog indicates that above the critical peptide concentration the 5-DSA molecules are attracted by peptide molecules, forming nanoclusters. As the 5-DSA molecules represent a model for the behavior of fatty acids participating in bacterial membrane homeostasis, such capturing action by Tric may represent an additional mechanism of its antibiotic activity.
Copyright © 2018 Elsevier B.V. All rights reserved.

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Keywords:  Dipolar spectroscopy; EPR; ESEEM; Fatty acids; Ion channels; PELDOR; Trichogin

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Year:  2018        PMID: 30550880     DOI: 10.1016/j.bbamem.2018.12.006

Source DB:  PubMed          Journal:  Biochim Biophys Acta Biomembr        ISSN: 0005-2736            Impact factor:   3.747


  3 in total

Review 1.  The Diverse World of Foldamers: Endless Possibilities of Self-Assembly.

Authors:  Samuele Rinaldi
Journal:  Molecules       Date:  2020-07-18       Impact factor: 4.411

2.  Is Cys(MTSL) the Best α-Amino Acid Residue to Electron Spin Labeling of Synthetically Accessible Peptide Molecules with Nitroxides?

Authors:  Barbara Biondi; Victoria N Syryamina; Gabriele Rocchio; Antonio Barbon; Fernando Formaggio; Claudio Toniolo; Jan Raap; Sergei A Dzuba
Journal:  ACS Omega       Date:  2022-01-31

3.  Targeted Amino Acid Substitutions in a Trichoderma Peptaibol Confer Activity against Fungal Plant Pathogens and Protect Host Tissues from Botrytis cinerea Infection.

Authors:  Marta De Zotti; Luca Sella; Angela Bolzonello; Laura Gabbatore; Cristina Peggion; Alessandro Bortolotto; Ibrahim Elmaghraby; Silvio Tundo; Francesco Favaron
Journal:  Int J Mol Sci       Date:  2020-10-12       Impact factor: 5.923

  3 in total

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