Literature DB >> 30550856

Ribosomal protein eL42 contributes to the catalytic activity of the yeast ribosome at the elongation step of translation.

Codjo Hountondji1, Jean-Bernard Créchet2, Mayo Tanaka3, Mieko Suzuki4, Jun-Ichi Nakayama5, Blanche Aguida2, Konstantin Bulygin6, Jean Cognet7, Galina Karpova8, Soria Baouz2.   

Abstract

The GGQ minidomain of the ribosomal protein eL42 was previously shown to contact the CCA-arm of P-site bound tRNA in human ribosome, indicating a possible involvement of the protein in the catalytic activity. Here, using Schizosaccharomyces pombe (S. pombe) cells, we demonstrate that the GGQ minidomain and neighboring region of eL42 is critical for the ribosomal function. Mutant eL42 proteins containing amino acid substitutions within or adjacent to the GGQ minidomain failed to complement the function of wild-type eL42, and expression of the mutant eL42 proteins led to severe growth defects. These results suggest that the mutations in eL42 interfere with the ribosomal function in vivo. Furthermore, we show that some of the mutations associated with the conserved GGQ region lead to reduced activities in the poly(Phe) synthesis and/or in the peptidyl transferase reaction with respect to puromycin, as compared with those of the wild-type ribosomes. A pK value of 6.95 was measured for the side chain of Lys-55/Arg-55, which is considerably less than that of a Lys or Arg residue. Altogether, our findings suggest that eL42 contributes to the 80S ribosome's peptidyl transferase activity by promoting the course of the elongation cycle.
Copyright © 2018 Elsevier B.V. and Société Française de Biochimie et Biologie Moléculaire (SFBBM). All rights reserved.

Entities:  

Keywords:  Eukaryal 80S ribosomes; Lys-55 of S. pombe eL42; Mechanism of peptidyl transfer and peptidyl-tRNA hydrolysis by eukaryotic 80S ribosomes; The peptidyl transferase center of 80S ribosomes from eukaryotes; eL42 protein from human or Schizosaccharomyces pombe; the GGQ motif of eL42

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Year:  2018        PMID: 30550856     DOI: 10.1016/j.biochi.2018.12.005

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  2 in total

1.  Differential Paralog-Specific Expression of Multiple Small Subunit Proteins Cause Variations in Rpl42/eL42 Incorporation in Ribosome in Fission Yeast.

Authors:  Wenzhu Li; Jing Zhang; Wenpeng Cheng; Yuze Li; Jinwen Feng; Jun Qin; Xiangwei He
Journal:  Cells       Date:  2022-08-02       Impact factor: 7.666

2.  G-quadruplex-forming aptamer enhances the peroxidase activity of myoglobin against luminol.

Authors:  Kaori Tsukakoshi; Yasuko Yamagishi; Mana Kanazashi; Kenta Nakama; Daiki Oshikawa; Nasa Savory; Akimasa Matsugami; Fumiaki Hayashi; Jinhee Lee; Taiki Saito; Koji Sode; Kanjana Khunathai; Hitoshi Kuno; Kazunori Ikebukuro
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

  2 in total

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