Literature DB >> 30545845

Structure of the posttranslational Sec protein-translocation channel complex from yeast.

Samuel Itskanov1, Eunyong Park2.   

Abstract

The Sec61 protein-conducting channel mediates transport of many proteins, such as secretory proteins, across the endoplasmic reticulum (ER) membrane during or after translation. Posttranslational transport is enabled by two additional membrane proteins associated with the channel, Sec63 and Sec62, but its mechanism is poorly understood. We determined a structure of the Sec complex (Sec61-Sec63-Sec71-Sec72) from Saccharomyces cerevisiae by cryo-electron microscopy (cryo-EM). The structure shows that Sec63 tightly associates with Sec61 through interactions in cytosolic, transmembrane, and ER-luminal domains, prying open Sec61's lateral gate and translocation pore and thus activating the channel for substrate engagement. Furthermore, Sec63 optimally positions binding sites for cytosolic and luminal chaperones in the complex to enable efficient polypeptide translocation. Our study provides mechanistic insights into eukaryotic posttranslational protein translocation.
Copyright © 2019 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

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Year:  2018        PMID: 30545845      PMCID: PMC6760253          DOI: 10.1126/science.aav6740

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  40 in total

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Authors:  K E Matlack; B Misselwitz; K Plath; T A Rapoport
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2.  Electrostatics of nanosystems: application to microtubules and the ribosome.

Authors:  N A Baker; D Sept; S Joseph; M J Holst; J A McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

3.  X-ray structure of a protein-conducting channel.

Authors:  Bert Van den Berg; William M Clemons; Ian Collinson; Yorgo Modis; Enno Hartmann; Stephen C Harrison; Tom A Rapoport
Journal:  Nature       Date:  2003-12-03       Impact factor: 49.962

4.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

5.  Automated electron microscope tomography using robust prediction of specimen movements.

Authors:  David N Mastronarde
Journal:  J Struct Biol       Date:  2005-10       Impact factor: 2.867

6.  Modeling the effects of prl mutations on the Escherichia coli SecY complex.

Authors:  Margaret A Smith; William M Clemons; Cathrine J DeMars; Ann M Flower
Journal:  J Bacteriol       Date:  2005-09       Impact factor: 3.490

7.  Translocon pores in the endoplasmic reticulum are permeable to a neutral, polar molecule.

Authors:  D Heritage; W F Wonderlin
Journal:  J Biol Chem       Date:  2001-04-12       Impact factor: 5.157

8.  Mammalian Sec61 is associated with Sec62 and Sec63.

Authors:  H A Meyer; H Grau; R Kraft; S Kostka; S Prehn; K U Kalies; E Hartmann
Journal:  J Biol Chem       Date:  2000-05-12       Impact factor: 5.157

9.  Homologs of the yeast Sec complex subunits Sec62p and Sec63p are abundant proteins in dog pancreas microsomes.

Authors:  J Tyedmers; M Lerner; C Bies; J Dudek; M H Skowronek; I G Haas; N Heim; W Nastainczyk; J Volkmer; R Zimmermann
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-20       Impact factor: 11.205

10.  Identification of cytoplasmic residues of Sec61p involved in ribosome binding and cotranslational translocation.

Authors:  Zhiliang Cheng; Ying Jiang; Elisabet C Mandon; Reid Gilmore
Journal:  J Cell Biol       Date:  2005-01-03       Impact factor: 10.539

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  25 in total

Review 1.  The Principles of Protein Targeting and Transport Across Cell Membranes.

Authors:  Yuanyuan Chen; Sri Karthika Shanmugam; Ross E Dalbey
Journal:  Protein J       Date:  2019-06       Impact factor: 2.371

Review 2.  Structural Basis of the Sec Translocon and YidC Revealed Through X-ray Crystallography.

Authors:  Tomoya Tsukazaki
Journal:  Protein J       Date:  2019-06       Impact factor: 2.371

3.  C-terminal tail length guides insertion and assembly of membrane proteins.

Authors:  Sha Sun; Malaiyalam Mariappan
Journal:  J Biol Chem       Date:  2020-09-02       Impact factor: 5.157

Review 4.  TPR-containing proteins control protein organization and homeostasis for the endoplasmic reticulum.

Authors:  Jill B Graham; Nathan P Canniff; Daniel N Hebert
Journal:  Crit Rev Biochem Mol Biol       Date:  2019-04-26       Impact factor: 8.250

Review 5.  Membrane Protein Integration and Topogenesis at the ER.

Authors:  Martin Spiess; Tina Junne; Marco Janoschke
Journal:  Protein J       Date:  2019-06       Impact factor: 2.371

6.  Overlapping function of Hrd1 and Ste24 in translocon quality control provides robust channel surveillance.

Authors:  Avery M Runnebohm; Kyle A Richards; Courtney Broshar Irelan; Samantha M Turk; Halie E Vitali; Christopher J Indovina; Eric M Rubenstein
Journal:  J Biol Chem       Date:  2020-10-08       Impact factor: 5.157

7.  Structure of the mitochondrial import gate reveals distinct preprotein paths.

Authors:  Yuhei Araiso; Akihisa Tsutsumi; Jian Qiu; Kenichiro Imai; Takuya Shiota; Jiyao Song; Caroline Lindau; Lena-Sophie Wenz; Haruka Sakaue; Kaori Yunoki; Shin Kawano; Junko Suzuki; Marilena Wischnewski; Conny Schütze; Hirotaka Ariyama; Toshio Ando; Thomas Becker; Trevor Lithgow; Nils Wiedemann; Nikolaus Pfanner; Masahide Kikkawa; Toshiya Endo
Journal:  Nature       Date:  2019-10-10       Impact factor: 49.962

Review 8.  Complexity and Specificity of Sec61-Channelopathies: Human Diseases Affecting Gating of the Sec61 Complex.

Authors:  Mark Sicking; Sven Lang; Florian Bochen; Andreas Roos; Joost P H Drenth; Muhammad Zakaria; Richard Zimmermann; Maximilian Linxweiler
Journal:  Cells       Date:  2021-04-27       Impact factor: 6.600

9.  Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62.

Authors:  Samuel Itskanov; Katie M Kuo; James C Gumbart; Eunyong Park
Journal:  Nat Struct Mol Biol       Date:  2021-01-04       Impact factor: 15.369

10.  Asparagine-linked glycosylation is not directly coupled to protein translocation across the endoplasmic reticulum in Saccharomyces cerevisiae.

Authors:  Shiteshu Shrimal; Natalia A Cherepanova; Elisabet C Mandon; Sergey V Venev; Reid Gilmore
Journal:  Mol Biol Cell       Date:  2019-08-21       Impact factor: 4.138

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