Literature DB >> 30539458

Nucleic Acid Extraction from Human Biological Samples.

Sureni V Mullegama1, Michael O Alberti1, Cora Au1, Yan Li1, Traci Toy1, Vanina Tomasian1, Rena R Xian2,3.   

Abstract

Nucleic acid isolation is often the starting point for all downstream experiments in biomedical research. It is therefore the most crucial step in any molecular technique. DNA and RNA extraction follow protocols with standardized reagents, many of which are available in quality-controlled commercial kits. Irrespective of the protocol, successful extraction of high-quality nucleic acid from biological tissues requires sufficient disruption of the tissue and cellular structures, denaturation of nucleoprotein complexes, inactivation of nucleases, and nucleic acid purification. These steps can be modified based on nucleic acid of interest and biological sample source. This chapter addresses DNA and RNA extraction from a variety of sample and tissue types, including saliva, and formalin-fixed, paraffin-embedded tissues, which are often archived in clinical pathology laboratories. Special considerations and common pitfalls of each protocol will also be discussed, as will nucleic acid quantitation techniques.

Entities:  

Keywords:  Amniocyte; Blood; Bone marrow aspirate; Buccal cells; Cultured cells; DNA extraction; Formalin-fixed; Fresh/frozen tissue; Nucleic acids; Paraffin-embedded (FFPE) tissue; RNA; Saliva

Mesh:

Substances:

Year:  2019        PMID: 30539458     DOI: 10.1007/978-1-4939-8935-5_30

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  5 in total

1.  PCR and RT-PCR in the Diagnosis of Laboratory Animal Infections and in Health Monitoring.

Authors:  Susan R Compton
Journal:  J Am Assoc Lab Anim Sci       Date:  2020-06-24       Impact factor: 1.232

2.  A novel methodological approach to simultaneously extract high-quality total RNA and proteins from cortical and trabecular bone.

Authors:  Martina Faraldi; Laura Mangiavini; Caterina Conte; Giuseppe Banfi; Nicola Napoli; Giovanni Lombardi
Journal:  Open Biol       Date:  2022-05-04       Impact factor: 7.124

3.  Epitachophoresis is a novel versatile total nucleic acid extraction method.

Authors:  Vladimira Datinska; Pantea Gheibi; Keynttisha Jefferson; Jaeyoung Yang; Sri Paladugu; Carolina Dallett; Ivona Voracova; Frantisek Foret; Yann Astier
Journal:  Sci Rep       Date:  2021-11-23       Impact factor: 4.379

Review 4.  Formalin-Fixed and Paraffin-Embedded Samples for Next Generation Sequencing: Problems and Solutions.

Authors:  Gerardo Cazzato; Concetta Caporusso; Francesca Arezzo; Antonietta Cimmino; Anna Colagrande; Vera Loizzi; Gennaro Cormio; Teresa Lettini; Eugenio Maiorano; Vincenza Sara Scarcella; Paola Tarantino; Maricla Marrone; Alessandra Stellacci; Paola Parente; Paolo Romita; Aurora De Marco; Vincenzo Venerito; Caterina Foti; Giuseppe Ingravallo; Roberta Rossi; Leonardo Resta
Journal:  Genes (Basel)       Date:  2021-09-23       Impact factor: 4.096

5.  Correlation of APOBEC3G Polymorphism with Human Papillomavirus (HPV) Persistent Infection and Progression of Cervical Lesions.

Authors:  Shuang Sui; Hongxiang Chen; Lili Han; Lin Wang; Mayineur Niyazi; Kaichun Zhu
Journal:  Med Sci Monit       Date:  2019-09-17
  5 in total

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