Literature DB >> 30539436

Autopsy Biobanking: Biospecimen Procurement, Integrity, Storage, and Utilization.

Randy S Tashjian1, Ryan R Williams1, Harry V Vinters1,2,3, William H Yong4,5,6.   

Abstract

An autopsy is a specialized surgical procedure consisting of external and internal examination of a deceased individual for the purposes of documenting abnormalities and determining or confirming medical diagnoses that may have contributed to their death. One of the benefits of an autopsy is the opportunity to collect and store biospecimens for the purposes of biobanking. This chapter outlines the procedures necessary to procure, store, and utilize biospecimens obtained during an autopsy. With the emergence of molecular diagnostics, this chapter also discusses factors that influence the integrity of autopsy biospecimens prior to procurement. These include the postmortem interval, as well as premortem factors such as the patient's agonal state, biospecimen temperature, and pH.

Entities:  

Keywords:  Agonal state; Autopsy; Biobank; Biospecimen; Integrity; Postmortem interval; Temperature; pH

Mesh:

Year:  2019        PMID: 30539436      PMCID: PMC6777723          DOI: 10.1007/978-1-4939-8935-5_8

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  19 in total

Review 1.  Biosafety considerations for autopsy.

Authors:  Kurt B Nolte; David G Taylor; Jonathan Y Richmond
Journal:  Am J Forensic Med Pathol       Date:  2002-06       Impact factor: 0.921

2.  Systematic changes in gene expression in postmortem human brains associated with tissue pH and terminal medical conditions.

Authors:  Jun Z Li; Marquis P Vawter; David M Walsh; Hiroaki Tomita; Simon J Evans; Prabhakara V Choudary; Juan F Lopez; Abigail Avelar; Vida Shokoohi; Tisha Chung; Omar Mesarwi; Edward G Jones; Stanley J Watson; Huda Akil; William E Bunney; Richard M Myers
Journal:  Hum Mol Genet       Date:  2004-01-20       Impact factor: 6.150

3.  Postmortem mRNA profiling II: Practical considerations.

Authors:  Marielle Vennemann; Antje Koppelkamm
Journal:  Forensic Sci Int       Date:  2010-08-17       Impact factor: 2.395

4.  Amplification of cDNA via RT-PCR using RNA extracted from postmortem tissues.

Authors:  T W Phang; C Y Shi; J N Chia; C N Ong
Journal:  J Forensic Sci       Date:  1994-09       Impact factor: 1.832

Review 5.  A practical approach to clinical and research biobanking.

Authors:  William H Yong; Sarah M Dry; Maryam Shabihkhani
Journal:  Methods Mol Biol       Date:  2014

6.  Human postmortem tissue: what quality markers matter?

Authors:  Ana D Stan; Subroto Ghose; Xue-Min Gao; Rosalinda C Roberts; Kelly Lewis-Amezcua; Kimmo J Hatanpaa; Carol A Tamminga
Journal:  Brain Res       Date:  2006-10-12       Impact factor: 3.252

7.  Effects of RNA degradation on gene expression analysis of human postmortem tissues.

Authors:  Jerry Lee; Aniko Hever; Dorian Willhite; Albert Zlotnik; Peter Hevezi
Journal:  FASEB J       Date:  2005-06-13       Impact factor: 5.191

8.  Pathologists request autopsy revival.

Authors:  C Marwick
Journal:  JAMA       Date:  1995-06-28       Impact factor: 56.272

9.  Quantifying mRNA in postmortem human brain: influence of gender, age at death, postmortem interval, brain pH, agonal state and inter-lobe mRNA variance.

Authors:  Paul Preece; Nigel J Cairns
Journal:  Brain Res Mol Brain Res       Date:  2003-10-21

10.  Individual Case Analysis of Postmortem Interval Time on Brain Tissue Preservation.

Authors:  Jeffrey A Blair; Chunyu Wang; Damarys Hernandez; Sandra L Siedlak; Mark S Rodgers; Rojan K Achar; Lara M Fahmy; Sandy L Torres; Robert B Petersen; Xiongwei Zhu; Gemma Casadesus; Hyoung-Gon Lee
Journal:  PLoS One       Date:  2016-03-16       Impact factor: 3.240

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  2 in total

1.  Letter to the Editor. Progress in morgues: the time has come for a wide network of forensic research biobanks.

Authors:  Pamela Tozzo; Francesco Angiola; Luciana Caenazzo
Journal:  Int J Legal Med       Date:  2021-03-27       Impact factor: 2.686

2.  A glycomics and proteomics study of aging and Parkinson's disease in human brain.

Authors:  Rekha Raghunathan; John D Hogan; Adam Labadorf; Richard H Myers; Joseph Zaia
Journal:  Sci Rep       Date:  2020-07-30       Impact factor: 4.379

  2 in total

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