Literature DB >> 30538121

TET2-Dependent Hydroxymethylome Plasticity Reduces Melanoma Initiation and Progression.

Elise Bonvin1, Enrico Radaelli2,3, Martin Bizet1, Flavie Luciani4,5, Emilie Calonne1, Pascale Putmans1, David Nittner4,5,6, Nitesh Kumar Singh1, Sara Francesca Santagostino7,8, Valérie Petit9, Lionel Larue9, Jean Christophe Marine10,5, François Fuks11.   

Abstract

Although numerous epigenetic aberrancies accumulate in melanoma, their contribution to initiation and progression remain unclear. The epigenetic mark 5-hydroxymethylcytosine (5hmC), generated through TET-mediated DNA modification, is now referred to as the sixth base of DNA and has recently been reported as a potential biomarker for multiple types of cancer. Loss of 5hmC is an epigenetic hallmark of melanoma, but whether a decrease in 5hmc levels contributes directly to pathogenesis or whether it merely results from disease progression-associated epigenetic remodeling remains to be established. Here, we show that NRAS-driven melanomagenesis in mice is accompanied by an overall decrease in 5hmC and specific 5hmC gains in selected gene bodies. Strikingly, genetic ablation of Tet2 in mice cooperated with oncogenic NRASQ61K to promote melanoma initiation while suppressing specific gains in 5hmC. We conclude that TET2 acts as a barrier to melanoma initiation and progression, partly by promoting 5hmC gains in specific gene bodies. SIGNIFICANCE: This work emphasizes the importance of epigenome plasticity in cancer development and highlights the involvement of druggable epigenetic factors in cancer. ©2018 American Association for Cancer Research.

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Year:  2018        PMID: 30538121      PMCID: PMC6612266          DOI: 10.1158/0008-5472.CAN-18-1214

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  54 in total

1.  Whole-genome expression profiling of the melanoma progression pathway reveals marked molecular differences between nevi/melanoma in situ and advanced-stage melanomas.

Authors:  Amanda Pfaff Smith; Keith Hoek; Dorothea Becker
Journal:  Cancer Biol Ther       Date:  2005-09-09       Impact factor: 4.742

2.  Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine.

Authors:  Chun-Xiao Song; Keith E Szulwach; Ye Fu; Qing Dai; Chengqi Yi; Xuekun Li; Yujing Li; Chih-Hsin Chen; Wen Zhang; Xing Jian; Jing Wang; Li Zhang; Timothy J Looney; Baichen Zhang; Lucy A Godley; Leslie M Hicks; Bruce T Lahn; Peng Jin; Chuan He
Journal:  Nat Biotechnol       Date:  2010-12-12       Impact factor: 54.908

3.  Metastasizing melanoma formation caused by expression of activated N-RasQ61K on an INK4a-deficient background.

Authors:  Julien Ackermann; Manon Frutschi; Kostas Kaloulis; Thomas McKee; Andreas Trumpp; Friedrich Beermann
Journal:  Cancer Res       Date:  2005-05-15       Impact factor: 12.701

4.  Genetics and genomics of melanoma.

Authors:  Papia Ghosh; Lynda Chin
Journal:  Expert Rev Dermatol       Date:  2009-04-01

5.  Modeling Genomic Instability and Selection Pressure in a Mouse Model of Melanoma.

Authors:  Lawrence N Kwong; Lihua Zou; Sharmeen Chagani; Chandra Sekhar Pedamallu; Mingguang Liu; Shan Jiang; Alexei Protopopov; Jianhua Zhang; Gad Getz; Lynda Chin
Journal:  Cell Rep       Date:  2017-05-16       Impact factor: 9.423

6.  Beta-catenin induces immortalization of melanocytes by suppressing p16INK4a expression and cooperates with N-Ras in melanoma development.

Authors:  Véronique Delmas; Friedrich Beermann; Silvia Martinozzi; Suzanne Carreira; Julien Ackermann; Mayuko Kumasaka; Laurence Denat; Jane Goodall; Flavie Luciani; Amaya Viros; Nese Demirkan; Boris C Bastian; Colin R Goding; Lionel Larue
Journal:  Genes Dev       Date:  2007-11-15       Impact factor: 11.361

7.  BEDTools: The Swiss-Army Tool for Genome Feature Analysis.

Authors:  Aaron R Quinlan
Journal:  Curr Protoc Bioinformatics       Date:  2014-09-08

8.  i-cisTarget: an integrative genomics method for the prediction of regulatory features and cis-regulatory modules.

Authors:  Carl Herrmann; Bram Van de Sande; Delphine Potier; Stein Aerts
Journal:  Nucleic Acids Res       Date:  2012-06-20       Impact factor: 16.971

9.  Epigenetic mechanisms and genome stability.

Authors:  Emily L Putiri; Keith D Robertson
Journal:  Clin Epigenetics       Date:  2011-08-01       Impact factor: 6.551

10.  Mammalian homologue of the Caenorhabditis elegans UNC-76 protein involved in axonal outgrowth is a protein kinase C zeta-interacting protein.

Authors:  S Kuroda; N Nakagawa; C Tokunaga; K Tatematsu; K Tanizawa
Journal:  J Cell Biol       Date:  1999-02-08       Impact factor: 10.539

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  6 in total

1.  TET2 promotes anti-tumor immunity by governing G-MDSCs and CD8+ T-cell numbers.

Authors:  Shuangqi Li; Jiuxing Feng; Feizhen Wu; Jiabin Cai; Xinyu Zhang; Haikun Wang; Irfete S Fetahu; Isabella Iwanicki; Dingailu Ma; Tao Hu; Hang Liu; Bingjie Wang; Guoming Shi; Li Tan; Yujiang Geno Shi
Journal:  EMBO Rep       Date:  2020-09-14       Impact factor: 8.807

2.  Classification and Grading of Melanocytic Lesions in a Mouse Model of NRAS-driven Melanomagenesis.

Authors:  Charles-Antoine Assenmacher; Sara F Santagostino; Mark A Oyama; Jean-Christophe Marine; Elise Bonvin; Enrico Radaelli
Journal:  J Histochem Cytochem       Date:  2020-12-07       Impact factor: 2.479

3.  Genome-wide characterization of 5-hydoxymethylcytosine in melanoma reveals major differences with nevus.

Authors:  Catarina Salgado; Jan Oosting; Bart Janssen; Rajiv Kumar; Nelleke Gruis; Remco van Doorn
Journal:  Genes Chromosomes Cancer       Date:  2020-02-13       Impact factor: 5.006

4.  Restoration of TET2 deficiency inhibits tumor growth in head neck squamous cell carcinoma.

Authors:  Rong Huang; Yi Wang; Han Ge; Dongmiao Wang; Yanling Wang; Wei Zhang; Jianrong Yang; Jie Cheng
Journal:  Ann Transl Med       Date:  2020-03

5.  Ten-eleven translocation protein 1 modulates medulloblastoma progression.

Authors:  Hyerim Kim; Yunhee Kang; Yujing Li; Li Chen; Li Lin; Nicholas D Johnson; Dan Zhu; M Hope Robinson; Leon McSwain; Benjamin G Barwick; Xianrui Yuan; Xinbin Liao; Jie Zhao; Zhiping Zhang; Qiang Shu; Jianjun Chen; Emily G Allen; Anna M Kenney; Robert C Castellino; Erwin G Van Meir; Karen N Conneely; Paula M Vertino; Peng Jin; Jian Li
Journal:  Genome Biol       Date:  2021-04-29       Impact factor: 13.583

Review 6.  TETology: Epigenetic Mastermind in Action.

Authors:  Ashikh Seethy; Karthikeyan Pethusamy; Indranil Chattopadhyay; Ramkishor Sah; Anita Chopra; Ruby Dhar; Subhradip Karmakar
Journal:  Appl Biochem Biotechnol       Date:  2021-03-10       Impact factor: 2.926

  6 in total

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