Literature DB >> 30537698

Stability and mean residence times for hybrid epithelial/mesenchymal phenotype.

Kuheli Biswas1, Mohit Kumar Jolly, Anandamohan Ghosh.   

Abstract

Cancer metastasis and drug resistance remain unsolved clinical challenges. A phenotypic transition that is often implicated in both these processes is epithelial-mesenchymal transition (EMT) during which epithelial cells weaken their cell-cell adhesion and gain traits of migration and invasion, typical of mesenchymal cells. However, recent studies indicate that apart from these two states, cells can also exist in one or more hybrid E/M state(s), which plays an aggressive role in progression of the disease. Furthermore, computational and experimental studies have identified a variety of phenotypic stability factors (PSFs) that stabilize the hybrid E/M state(s) and can increase disease aggressiveness. In this work, we study EMT regulatory networks, in the presence of different PSFs, as dynamical systems subjected to random fluctuations. The cells thus explore different stable E, M, E/M states in the potential landscape and our aim is to quantify the residence time in each of these states. Our stochastic simulations indicate an universal feature that the mean residence time (MRT) in the hybrid E/M state is enhanced in the presence of PSFs. We demonstrate that the feature is consistent for a variety of PSFs, namely, GRHL2, OVOL, ΔNp63α, miR-145/OCT4, participating in the core EMT regulatory network. Our results reveal potential targets for pushing cells out of a hybrid E/M state and thus halting metastatic progression.

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Mesh:

Year:  2019        PMID: 30537698     DOI: 10.1088/1478-3975/aaf7b7

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  14 in total

1.  Bidirectional interplay between physical and biological approaches on studying the epithelial-to-mesenchymal transition.

Authors:  Jianhua Xing
Journal:  Phys Biol       Date:  2020-02-28       Impact factor: 2.583

2.  Anticipating critical transitions in epithelial-hybrid-mesenchymal cell-fate determination.

Authors:  Sukanta Sarkar; Sudipta Kumar Sinha; Herbert Levine; Mohit Kumar Jolly; Partha Sharathi Dutta
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-16       Impact factor: 11.205

3.  Testing the gene expression classification of the EMT spectrum.

Authors:  Dongya Jia; Jason T George; Satyendra C Tripathi; Deepali L Kundnani; Mingyang Lu; Samir M Hanash; José N Onuchic; Mohit Kumar Jolly; Herbert Levine
Journal:  Phys Biol       Date:  2019-01-18       Impact factor: 2.583

Review 4.  Interconnected high-dimensional landscapes of epithelial-mesenchymal plasticity and stemness in cancer.

Authors:  Sarthak Sahoo; Bazella Ashraf; Atchuta Srinivas Duddu; Adrian Biddle; Mohit Kumar Jolly
Journal:  Clin Exp Metastasis       Date:  2022-01-07       Impact factor: 5.150

Review 5.  Intrinsically Disordered Proteins: Critical Components of the Wetware.

Authors:  Prakash Kulkarni; Supriyo Bhattacharya; Srisairam Achuthan; Amita Behal; Mohit Kumar Jolly; Sourabh Kotnala; Atish Mohanty; Govindan Rangarajan; Ravi Salgia; Vladimir Uversky
Journal:  Chem Rev       Date:  2022-02-16       Impact factor: 72.087

Review 6.  Cancer Biology and Prevention in Diabetes.

Authors:  Swayam Prakash Srivastava; Julie E Goodwin
Journal:  Cells       Date:  2020-06-02       Impact factor: 6.600

7.  Analysis of immune subtypes across the epithelial-mesenchymal plasticity spectrum.

Authors:  Priyanka Chakraborty; Emily L Chen; Isabelle McMullen; Andrew J Armstrong; Mohit Kumar Jolly; Jason A Somarelli
Journal:  Comput Struct Biotechnol J       Date:  2021-06-17       Impact factor: 7.271

Review 8.  Hypoxia, partial EMT and collective migration: Emerging culprits in metastasis.

Authors:  Kritika Saxena; Mohit Kumar Jolly; Kuppusamy Balamurugan
Journal:  Transl Oncol       Date:  2020-08-08       Impact factor: 4.243

9.  A mechanism for epithelial-mesenchymal heterogeneity in a population of cancer cells.

Authors:  Shubham Tripathi; Priyanka Chakraborty; Herbert Levine; Mohit Kumar Jolly
Journal:  PLoS Comput Biol       Date:  2020-02-10       Impact factor: 4.475

10.  A plausible accelerating function of intermediate states in cancer metastasis.

Authors:  Hanah Goetz; Juan R Melendez-Alvarez; Luonan Chen; Xiao-Jun Tian
Journal:  PLoS Comput Biol       Date:  2020-03-10       Impact factor: 4.475

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