| Literature DB >> 30530896 |
Elena Yu Bragina1, Irina A Goncharova1, Anna F Garaeva1,2, Evgeniy V Nemerov2, Anastasija A Babovskaya2, Andrey B Karpov3, Yulia V Semenova4, Irina Z Zhalsanova1, Densema E Gomboeva1, Olga V Saik5, Olga I Zolotareva6,7, Vladimir A Ivanisenko5, Victor E Dosenko8, Ralf Hofestaedt6, Maxim B Freidin1.
Abstract
Comorbidity, a co-incidence of several disorders in an individual, is a common phenomenon. Their development is governed by multiple factors, including genetic variation. The current study was set up to look at associations between isolated and comorbid diseases of bronchial asthma and hypertension, on one hand, and single nucleotide polymorphisms associated with regulation of gene expression (eQTL), on the other hand. A total of 96 eQTL SNPs were genotyped in 587 Russian individuals. Bronchial asthma alone was found to be associated with rs1927914 (TLR4), rs1928298 (intergenic variant), and rs1980616 (SERPINA1); hypertension alone was found to be associated with rs11065987 (intergenic variant); rs2284033 (IL2RB), rs11191582 (NT5C2), and rs11669386 (CARD8); comorbidity between asthma and hypertension was found to be associated with rs1010461 (ANG/RNASE4), rs7038716, rs7026297 (LOC105376244), rs7025144 (intergenic variant), and rs2022318 (intergenic variant). The results suggest that genetic background of comorbidity of asthma and hypertension is different from genetic backgrounds of both diseases manifesting isolated.Entities:
Keywords: Bronchial Asthma; Comorbidity; Hypertension; SNP; eQTL
Mesh:
Year: 2018 PMID: 30530896 PMCID: PMC6348747 DOI: 10.1515/jib-2018-0052
Source DB: PubMed Journal: J Integr Bioinform ISSN: 1613-4516
Characteristics of the study groups.
| Group | Sample size (%) | Age, years | |
|---|---|---|---|
| mean ± SD | range | ||
| Hypertension | 144 | 44.9 ± 8.9 | 39–60 |
| Males | 97 (67.4 %) | ||
| Females | 47 (32.6 %) | ||
| Asthma | 145 | 44.9 ± 8.9 | 28–68 |
| Males | 39 (26.9 %) | ||
| Females | 106 (73.1 %) | ||
| Hypertension+Asthma | 146 | 56.3 ± 10.5 | 26–75 |
| Males | 40 (27.4 %) | ||
| Females | 106 (72.6 %) | ||
| Control | 152 | 47.7 ± 9.9 | 31–74 |
| Males | 40 (26.3 %) | ||
| Females | 112 (73.7 %) | ||
| Total | 587 | ||
SD, standard deviation.
Genotypes prevalence in the studied groups for polymorphisms nominally associated with at least one of the studied phenotypes.
| SNP ID (localisation, functional consequence) | Genotype | BA (%) | Hypertension (%) | BA+ Hypertension (%) | Control (%) |
|---|---|---|---|---|---|
| rs1927914 ( | AA | 51 (35.7) | 62 (43.4) | 75 (51.7) | 75 (51.4) |
| AG | 82 (57.3) | 68 (47.6) | 61 (42.1) | 57 (39.0) | |
| GG | 10 (7.0) | 13 (9.0) | 9 (6.2) | 14 (9.6) | |
|
| 0.5915 | 0.5571 | |||
| rs1928298 (intergenic) | TT | 52 (37.4) | 61 (43.9) | 73 (52.5) | 74 (51.1) |
| TC | 76 (54.7) | 66 (47.5) | 57 (41.0) | 58 (40.0) | |
| CC | 11 (7.9) | 12 (8.6) | 9 (6.5) | 13 (8.9) | |
|
| 0.7059 | 0.6119 | |||
| rs1980616 ( | CC | 96 (67.1) | 80 (56.3) | 83 (57.2) | 82 (56.9) |
| CT | 44 (30.8) | 53 (37.3) | 55 (37.9) | 54(37.5) | |
| TT | 3 (2.1) | 9 (6.3) | 7 (4.8) | 8 (5.6) | |
|
| 0.7530 | 0.6592 | |||
| rs11065987 (intergenic) | AA | 51 (36.2) | 54 (38.8) | 42 (29.2) | 47 (31.5) |
| AG | 63 (44.7) | 69 (49.6) | 69 (47.9) | 36 (24.2) | |
| GG | 27 (19.1) | 16 (11.5) | 33 (22.9) | 66 (44.3) | |
| 0.2922 | 0.7872 | ||||
| rs2284033 ( | GG | 41 (31.5) | 45 (31.5) | 37 (28.9) | 32 (25.6) |
| GA | 57 (43.8) | 53 (37.1) | 56 (43.8) | 51 (40.8) | |
| AA | 32 (24.6) | 45 (31.5) | 35 (27.3) | 42 (33.6) | |
| 0.1308 | 0.3451 | ||||
| rs11191582 ( | GG | 114 (80.3) | 121 (86.4) | 114 (79.7) | 115 (77.7) |
| GA | 28 (19.7) | 19 (13.6) | 27 (18.9) | 33 (22.3) | |
| AA | 0 (0.0) | 0 (0.0) | 2 (1.4) | 0 (0.0) | |
| 0.6743 | 0.6273 | ||||
| rs11669386 ( | AA | 47 (32.9) | 43 (30.5) | 42 (29.4) | 31 (21.5) |
| AG | 65 (45.5) | 73 (51.8) | 65 (45.5) | 78 (54.2) | |
| GG | 31 (21.7) | 25 (17.7) | 36 (25.2) | 35 (24.3) | |
| 0.0746 | 0.7157 | ||||
| rs1010461 ( | AA | 41 (28.5) | 57 (40.1) | 57 (39.3) | 43 (29.1) |
| AC | 81 (56.3) | 62 (43.7) | 66 (45.5) | 62 (41.9) | |
| CC | 22 (15.3) | 23 (16.2) | 22 (15.2) | 43 (29.1) | |
| 0.1346 | 0.0728 | ||||
| rs7038716 ( | AA | 93 (65.5) | 87 (62.6) | 68 (47.9) | 94 (63.9) |
| AT | 46 (32.4) | 42 (30.2) | 66 (46.5) | 46 (31.3) | |
| TT | 3 (2.1) | 10 (7.2) | 8 (5.6) | 7 (4.8) | |
| 0.4580 | 0.9637 | ||||
| rs7026297 ( | CC | 90 (63.8) | 88 (62.9) | 70 (49.3) | 89 (62.2) |
| CT | 47 (33.3) | 42 (30.0) | 65 (45.8) | 47 (32.9) | |
| TT | 4 (2.8) | 10 (7.1) | 7 (4.9) | 7 (4.9) | |
| 0.5023 | 0.8979 | ||||
| rs7025144 (intergenic) | CC | 86 (60.6) | 89 (62.7) | 70 (48.6) | 89 (61.4) |
| CT | 52 (36.6) | 45 (31.7) | 67 (46.5) | 49 (33.8) | |
| TT | 4 (2.8) | 8 (5.6) | 7 (4.9) | 7 (4.8) | |
| 0.7464 | 0.9369 | ||||
| rs2022318 (intergenic) | GG | 45 (31.9) | 55 (39.3) | 42 (28.4) | 53 (35.8) |
| GC | 75 (53.2) | 61 (43.6) | 64 (43.2) | 74 (50.0) | |
| CC | 21 (14.9) | 24 (17.1) | 42 (28.4) | 21 (14.2) | |
| 0.5132 | 0.8730 |
p – p-value for additive model of association between disorders and SNPs; highlighted are p-values < 0.05, the significance threshold in the current study; BA – bronchial asthma.