Literature DB >> 30526885

Transcription Factors Drive Tet2-Mediated Enhancer Demethylation to Reprogram Cell Fate.

Jose Luis Sardina, Samuel Collombet, Tian V Tian, Antonio Gómez, Bruno Di Stefano, Clara Berenguer, Justin Brumbaugh, Ralph Stadhouders, Carolina Segura-Morales, Marta Gut, Ivo G Gut, Simon Heath, Sergi Aranda, Luciano Di Croce, Konrad Hochedlinger, Denis Thieffry, Thomas Graf.   

Abstract

Entities:  

Year:  2018        PMID: 30526885      PMCID: PMC6292969          DOI: 10.1016/j.stem.2018.11.001

Source DB:  PubMed          Journal:  Cell Stem Cell        ISSN: 1875-9777            Impact factor:   24.633


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(Cell Stem Cell 23, 727–741.e1–e9, November 1, 2018) In the initial online and print versions of our manuscript, we mistakenly mislabeled the heatmaps in Figure 6B. The original and corrected versions of Figure 6B appear below, and the online version of our manuscript now contains the correct labeling. We apologize for the confusion. 5hmC-Mediated Early Demethylation of Regulatory Regions of Pluripotency Genes during Accelerated Reprogramming Systems (corrected) 5hmC-Mediated Early Demethylation of Regulatory Regions of Pluripotency Genes during Accelerated Reprogramming Systems (original)
  22 in total

Review 1.  Chromatin accessibility dynamics during cell fate reprogramming.

Authors:  Dongwei Li; Xiaodong Shu; Ping Zhu; Duanqing Pei
Journal:  EMBO Rep       Date:  2021-01-22       Impact factor: 8.807

2.  Coactivation of NF-κB and Notch signaling is sufficient to induce B-cell transformation and enables B-myeloid conversion.

Authors:  Yan Xiu; Qianze Dong; Lin Fu; Aaron Bossler; Xiaobing Tang; Brendan Boyce; Nicholas Borcherding; Mariah Leidinger; José Luis Sardina; Hai-Hui Xue; Qingchang Li; Andrew Feldman; Iannis Aifantis; Francesco Boccalatte; Lili Wang; Meiling Jin; Joseph Khoury; Wei Wang; Shimin Hu; Youzhong Yuan; Endi Wang; Ji Yuan; Siegfried Janz; John Colgan; Hasem Habelhah; Thomas Waldschmidt; Markus Müschen; Adam Bagg; Benjamin Darbro; Chen Zhao
Journal:  Blood       Date:  2020-01-09       Impact factor: 22.113

Review 3.  Toward a Mechanistic Understanding of DNA Methylation Readout by Transcription Factors.

Authors:  Judith F Kribelbauer; Xiang-Jun Lu; Remo Rohs; Richard S Mann; Harmen J Bussemaker
Journal:  J Mol Biol       Date:  2019-11-02       Impact factor: 5.469

Review 4.  Mechanisms that regulate the activities of TET proteins.

Authors:  Kanak Joshi; Shanhui Liu; Peter Breslin S J; Jiwang Zhang
Journal:  Cell Mol Life Sci       Date:  2022-06-15       Impact factor: 9.207

Review 5.  Deciphering the multifaceted roles of TET proteins in T-cell lineage specification and malignant transformation.

Authors:  Ageliki Tsagaratou
Journal:  Immunol Rev       Date:  2021-01-07       Impact factor: 12.988

6.  DNMT3A haploinsufficiency causes dichotomous DNA methylation defects at enhancers in mature human immune cells.

Authors:  Jung-Yeon Lim; Sascha H Duttke; Turner S Baker; Jihye Lee; Kristyne J Gambino; Nicholas J Venturini; Jessica Sook Yuin Ho; Simin Zheng; Yesai S Fstkchyan; Vinodh Pillai; David C Fajgenbaum; Ivan Marazzi; Christopher Benner; Minji Byun
Journal:  J Exp Med       Date:  2021-05-10       Impact factor: 17.579

7.  Single cell RNA-seq identifies the origins of heterogeneity in efficient cell transdifferentiation and reprogramming.

Authors:  Mirko Francesconi; Bruno Di Stefano; Clara Berenguer; Luisa de Andrés-Aguayo; Marcos Plana-Carmona; Maria Mendez-Lago; Amy Guillaumet-Adkins; Gustavo Rodriguez-Esteban; Marta Gut; Ivo G Gut; Holger Heyn; Ben Lehner; Thomas Graf
Journal:  Elife       Date:  2019-03-12       Impact factor: 8.140

Review 8.  DNA Methylation of Enhancer Elements in Myeloid Neoplasms: Think Outside the Promoters?

Authors:  Raquel Ordoñez; Nicolás Martínez-Calle; Xabier Agirre; Felipe Prosper
Journal:  Cancers (Basel)       Date:  2019-09-24       Impact factor: 6.639

9.  Fine-mapping and cell-specific enrichment at corneal resistance factor loci prioritize candidate causal regulatory variants.

Authors:  Xinyi Jiang; Nefeli Dellepiane; Erola Pairo-Castineira; Thibaud Boutin; Yatendra Kumar; Wendy A Bickmore; Veronique Vitart
Journal:  Commun Biol       Date:  2020-12-11

10.  Divergent Effects of Dnmt3a and Tet2 Mutations on Hematopoietic Progenitor Cell Fitness.

Authors:  Elizabeth L Ostrander; Ashley C Kramer; Cates Mallaney; Hamza Celik; Won Kyun Koh; Jake Fairchild; Emily Haussler; Christine R C Zhang; Grant A Challen
Journal:  Stem Cell Reports       Date:  2020-03-26       Impact factor: 7.765

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