Literature DB >> 30523829

Flexibility defines structure in crystals of amphiphilic DNA nanostars.

Ryan A Brady1, Will T Kaufhold, Nicholas J Brooks, Vito Foderà, Lorenzo Di Michele.   

Abstract

DNA nanostructures with programmable shape and interactions can be used as building blocks for the self-assembly of crystalline materials with prescribed nanoscale features, holding a vast technological potential. Structural rigidity and bond directionality have been recognised as key design features for DNA motifs to sustain long-range order in 3D, but the practical challenges associated with prescribing building-block geometry with sufficient accuracy have limited the variety of available designs. We have recently introduced a novel platform for the one-pot preparation of crystalline DNA frameworks supported by a combination of Watson-Crick base pairing and hydrophobic forces (Brady et al 2017 Nano Lett. 17 3276-81). Here we use small angle x-ray scattering and coarse-grained molecular simulations to demonstrate that, as opposed to available all-DNA approaches, amphiphilic motifs do not rely on structural rigidity to support long-range order. Instead, the flexibility of amphiphilic DNA building-blocks is a crucial feature for successful crystallisation.

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Year:  2018        PMID: 30523829     DOI: 10.1088/1361-648X/aaf4a1

Source DB:  PubMed          Journal:  J Phys Condens Matter        ISSN: 0953-8984            Impact factor:   2.333


  4 in total

1.  Cation-Responsive and Photocleavable Hydrogels from Noncanonical Amphiphilic DNA Nanostructures.

Authors:  Giacomo Fabrini; Aisling Minard; Ryan A Brady; Marco Di Antonio; Lorenzo Di Michele
Journal:  Nano Lett       Date:  2022-01-13       Impact factor: 11.189

Review 2.  Amphiphilic DNA nanostructures for bottom-up synthetic biology.

Authors:  Roger Rubio-Sánchez; Giacomo Fabrini; Pietro Cicuta; Lorenzo Di Michele
Journal:  Chem Commun (Camb)       Date:  2021-11-30       Impact factor: 6.222

3.  Reaction-Diffusion Patterning of DNA-Based Artificial Cells.

Authors:  Adrian Leathers; Michal Walczak; Ryan A Brady; Assala Al Samad; Jurij Kotar; Michael J Booth; Pietro Cicuta; Lorenzo Di Michele
Journal:  J Am Chem Soc       Date:  2022-09-14       Impact factor: 16.383

4.  Counterion-Dependent Mechanisms of DNA Origami Nanostructure Stabilization Revealed by Atomistic Molecular Simulation.

Authors:  Job A L Roodhuizen; Philip J T M Hendrikx; Peter A J Hilbers; Tom F A de Greef; Albert J Markvoort
Journal:  ACS Nano       Date:  2019-09-16       Impact factor: 15.881

  4 in total

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