Literature DB >> 30523770

Novel Inhibitors of DNA Repair Enzyme TDP1 Combining Monoterpenoid and Adamantane Fragments.

Evgenii S Mozhaitsev1, Alexandra L Zakharenko2, Evgeniy V Suslov1, Dina V Korchagina1, Olga D Zakharova2, Inna A Vasil'eva2, Arina A Chepanova2, Ellena Black3, Jinal Patel3, Raina Chand3, Jóhannes Reynisson3, Ivanhoe K H Leung3, Konstantin P Volcho1,4, Nariman F Salakhutdinov1,4, Olga I Lavrik2,4.   

Abstract

BACKGROUND AND
OBJECTIVE: The DNA repair enzyme tyrosyl-DNA-phosphodiesterase 1 (TDP1) is a current inhibition target to improve the efficacy of cancer chemotherapy. Previous studies showed that compounds combining adamantane and monoterpenoid fragments are active against TDP1 enzyme. This investigation is focused on the synthesis of monoterpenoid derived esters of 1-adamantane carboxylic acid as TDP1 inhibitors.
METHODS: New esters were synthesized by the interaction between 1-adamantane carboxylic acid chloride and monoterpenoid alcohols. The esters were tested against TDP1 and its binding to the enzyme was modeling.
RESULTS: 13 Novel ester-based TDP1 inhibitors were synthesized with yields of 21-94%; of these, nine esters had not been previously described. A number of the esters were found to inhibit TDP1, with IC50 values ranging from 0.86-4.08 µM. Molecular modelling against the TDP1 crystal structure showed a good fit of the active esters in the catalytic pocket, explaining their potency. A non-toxic dose of ester, containing a 3,7- dimethyloctanol fragment, was found to enhance the cytotoxic effect of topotecan, a clinically used anti-cancer drug, against the human lung adenocarcinoma cell line A549.
CONCLUSION: The esters synthesized were found to be active against TDP1 in the lower micromolar concentration range, with these findings being corroborated by molecular modeling. Simultaneous action of the ester synthesized from 3,7-dimethyloctanol-1 and topotecan revealed a synergistic effect. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.net.

Entities:  

Keywords:  3,7-dimethyloctanol; Citronellol; chemical space; cytotoxicity; esters; inhibitors; molecular modelling; terpene.

Mesh:

Substances:

Year:  2019        PMID: 30523770     DOI: 10.2174/1871520619666181207094243

Source DB:  PubMed          Journal:  Anticancer Agents Med Chem        ISSN: 1871-5206            Impact factor:   2.505


  8 in total

1.  Adamantane-Monoterpenoid Conjugates Linked via Heterocyclic Linkers Enhance the Cytotoxic Effect of Topotecan.

Authors:  Aldar A Munkuev; Nadezhda S Dyrkheeva; Tatyana E Kornienko; Ekaterina S Ilina; Dmitry I Ivankin; Evgeniy V Suslov; Dina V Korchagina; Yuriy V Gatilov; Alexandra L Zakharenko; Anastasia A Malakhova; Jóhannes Reynisson; Konstantin P Volcho; Nariman F Salakhutdinov; Olga I Lavrik
Journal:  Molecules       Date:  2022-05-24       Impact factor: 4.927

2.  New Hydrazinothiazole Derivatives of Usnic Acid as Potent Tdp1 Inhibitors.

Authors:  Aleksander S Filimonov; Arina A Chepanova; Olga A Luzina; Alexandra L Zakharenko; Olga D Zakharova; Ekaterina S Ilina; Nadezhda S Dyrkheeva; Maxim S Kuprushkin; Anton V Kolotaev; Derenik S Khachatryan; Jinal Patel; Ivanhoe K H Leung; Raina Chand; Daniel M Ayine-Tora; Johannes Reynisson; Konstantin P Volcho; Nariman F Salakhutdinov; Olga I Lavrik
Journal:  Molecules       Date:  2019-10-15       Impact factor: 4.411

3.  Targeting Tyrosyl-DNA phosphodiesterase I to enhance toxicity of phosphodiester linked DNA-adducts.

Authors:  Evan J Brettrager; Robert C A M van Waardenburg
Journal:  Cancer Drug Resist       Date:  2019-12-19

4.  Promising New Inhibitors of Tyrosyl-DNA Phosphodiesterase I (Tdp 1) Combining 4-Arylcoumarin and Monoterpenoid Moieties as Components of Complex Antitumor Therapy.

Authors:  Tatyana M Khomenko; Alexandra L Zakharenko; Arina A Chepanova; Ekaterina S Ilina; Olga D Zakharova; Vasily I Kaledin; Valeriy P Nikolin; Nelly A Popova; Dina V Korchagina; Jóhannes Reynisson; Raina Chand; Daniel M Ayine-Tora; Jinal Patel; Ivanhoe K H Leung; Konstantin P Volcho; Nariman F Salakhutdinov; Olga I Lavrik
Journal:  Int J Mol Sci       Date:  2019-12-23       Impact factor: 5.923

5.  New Deoxycholic Acid Derived Tyrosyl-DNA Phosphodiesterase 1 Inhibitors Also Inhibit Tyrosyl-DNA Phosphodiesterase 2.

Authors:  Oksana V Salomatina; Nadezhda S Dyrkheeva; Irina I Popadyuk; Alexandra L Zakharenko; Ekaterina S Ilina; Nina I Komarova; Jóhannes Reynisson; Nariman F Salakhutdinov; Olga I Lavrik; Konstantin P Volcho
Journal:  Molecules       Date:  2021-12-23       Impact factor: 4.411

6.  Design, Synthesis, and Molecular Docking Study of New Tyrosyl-DNA Phosphodiesterase 1 (TDP1) Inhibitors Combining Resin Acids and Adamantane Moieties.

Authors:  Kseniya Kovaleva; Olga Yarovaya; Konstantin Ponomarev; Sergey Cheresiz; Amirhossein Azimirad; Irina Chernyshova; Alexandra Zakharenko; Vasily Konev; Tatiana Khlebnikova; Evgenii Mozhaytsev; Evgenii Suslov; Dmitry Nilov; Vytas Švedas; Andrey Pokrovsky; Olga Lavrik; Nariman Salakhutdinov
Journal:  Pharmaceuticals (Basel)       Date:  2021-05-01

7.  Design, Synthesis, and Biological Investigation of Novel Classes of 3-Carene-Derived Potent Inhibitors of TDP1.

Authors:  Irina V Il'ina; Nadezhda S Dyrkheeva; Alexandra L Zakharenko; Alexander Yu Sidorenko; Nikolay S Li-Zhulanov; Dina V Korchagina; Raina Chand; Daniel M Ayine-Tora; Arina A Chepanova; Olga D Zakharova; Ekaterina S Ilina; Jóhannes Reynisson; Anastasia A Malakhova; Sergey P Medvedev; Suren M Zakian; Konstantin P Volcho; Nariman F Salakhutdinov; Olga I Lavrik
Journal:  Molecules       Date:  2020-07-31       Impact factor: 4.411

8.  Discovery of Novel Sultone Fused Berberine Derivatives as Promising Tdp1 Inhibitors.

Authors:  Elizaveta D Gladkova; Arina A Chepanova; Ekaterina S Ilina; Alexandra L Zakharenko; Jóhannes Reynisson; Olga A Luzina; Konstantin P Volcho; Olga I Lavrik; Nariman F Salakhutdinov
Journal:  Molecules       Date:  2021-03-30       Impact factor: 4.411

  8 in total

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