Literature DB >> 30523412

DEPC modification of the CuA protein from Thermus thermophilus.

Taylor Devlin1,2, Cristina R Hofman1, Zachary P V Acevedo1, Kelsey R Kohler1, Lizhi Tao3, R David Britt3, Kevin R Hoke4, Laura M Hunsicker-Wang5.   

Abstract

The CuA center is the initial electron acceptor in cytochrome c oxidase, and it consists of two copper ions bridged by two cysteines and ligated by two histidines, a methionine, and a carbonyl in the peptide backbone of a nearby glutamine. The two ligating histidines are of particular interest as they may influence the electronic and redox properties of the metal center. To test for the presence of reactive ligating histidines, a portion of cytochrome c oxidase from the bacteria Thermus thermophilus that contains the CuA site (the TtCuA protein) was treated with the chemical modifier diethyl pyrocarbonate (DEPC) and the reaction followed through UV-visible, circular dichroism, and electron paramagnetic resonance spectroscopies at pH 5.0-9.0. A mutant protein (H40A/H117A) with the non-ligating histidines removed was similarly tested. Introduction of an electron-withdrawing DEPC-modification onto the ligating histidine 157 of TtCuA increased the reduction potential by over 70 mV, as assessed by cyclic voltammetry. Results from both proteins indicate that DEPC reacts with one of the two ligating histidines, modification of a ligating histidine raises the reduction potential of the CuA site, and formation of the DEPC adduct is reversible at room temperature. The existence of the reactive ligating histidine suggests that this residue may play a role in modulating the electronic and redox properties of TtCuA through kinetically-controlled proton exchange with the solvent. Lack of reactivity by the metalloproteins Sco and azurin, both of which contain a mononuclear copper center, indicate that reactivity toward DEPC is not a characteristic of all ligating histidines.

Entities:  

Keywords:  Chemical modification; Circular dichroism; CuA; Cyclic voltammetry; Cytochrome oxidase; Diethyl pyrocarbonate; Electrochemistry; UV–visible spectroscopy

Mesh:

Substances:

Year:  2018        PMID: 30523412      PMCID: PMC7187901          DOI: 10.1007/s00775-018-1632-y

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  57 in total

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Authors:  Luciano A Abriata; Damián Álvarez-Paggi; Gabriela N Ledesma; Ninian J Blackburn; Alejandro J Vila; Daniel H Murgida
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3.  Native Cu(A) redox sites are largely resilient to pH variations within a physiological range.

Authors:  Damián Alvarez-Paggi; Luciano A Abriata; Daniel H Murgida; Alejandro J Vila
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4.  Chemical modification of the Rieske protein from Thermus thermophilus using diethyl pyrocarbonate modifies ligating histidine 154 and reduces the [2FE-2S] cluster.

Authors:  Mary E Konkle; Kaitlin N Elsenheimer; Kevin Hakala; Jennifer C Robicheaux; Susan T Weintraub; Laura M Hunsicker-Wang
Journal:  Biochemistry       Date:  2010-08-31       Impact factor: 3.162

5.  Spectrochemical studies on the blue copper protein azurin from Alcaligenes denitrificans.

Authors:  E W Ainscough; A G Bingham; A M Brodie; W R Ellis; H B Gray; T M Loehr; J E Plowman; G E Norris; E N Baker
Journal:  Biochemistry       Date:  1987-01-13       Impact factor: 3.162

6.  Electrical current generation and proton pumping catalyzed by the ba3-type cytochrome c oxidase from Thermus thermophilus.

Authors:  A Kannt; T Soulimane; G Buse; A Becker; E Bamberg; H Michel
Journal:  FEBS Lett       Date:  1998-08-28       Impact factor: 4.124

7.  Molecular dynamics simulation of water in cytochrome c oxidase reveals two water exit pathways and the mechanism of transport.

Authors:  Ryogo Sugitani; Alexei A Stuchebrukhov
Journal:  Biochim Biophys Acta       Date:  2009-04-21

8.  Crystal structure analysis of oxidized Pseudomonas aeruginosa azurin at pH 5.5 and pH 9.0. A pH-induced conformational transition involves a peptide bond flip.

Authors:  H Nar; A Messerschmidt; R Huber; M van de Kamp; G W Canters
Journal:  J Mol Biol       Date:  1991-10-05       Impact factor: 5.469

9.  Water-soluble, recombinant CuA-domain of the cytochrome ba3 subunit II from Thermus thermophilus.

Authors:  C E Slutter; D Sanders; P Wittung; B G Malmström; R Aasa; J H Richards; H B Gray; J A Fee
Journal:  Biochemistry       Date:  1996-03-19       Impact factor: 3.162

10.  Water exit pathways and proton pumping mechanism in B-type cytochrome c oxidase from molecular dynamics simulations.

Authors:  Longhua Yang; Åge A Skjevik; Wen-Ge Han Du; Louis Noodleman; Ross C Walker; Andreas W Götz
Journal:  Biochim Biophys Acta       Date:  2016-06-16
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  1 in total

1.  Alison Butler: papers in celebration of her 2018 ACS Alfred Bader Award in Bioorganic or Bioinorganic Chemistry.

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  1 in total

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