| Literature DB >> 30521038 |
Daisuke Iizuka1,2, Shunsuke Izumi3, Fumio Suzuki4, Kenji Kamiya2.
Abstract
Microarrays containing 45 different lectins were analyzed to identify global changes in the glycosylation of serum glycoproteins from mice exposed to whole-body γ-radiation. The results showed that radiation exposure increased and decreased the relative amounts of α-2,3- and α-2,6-sialic acids, respectively. The expression of α-2,3- and α-2,6-sialyltransferase genes in the liver was analyzed to determine whether changes in their expression were responsible for the sialic acid changes. The increase in α-2,3-sialic acid correlated with St3gal5 upregulation after radiation exposure; however, a decrease in St6gal1 expression was not observed. Analysis of a PCR array of genes expressed in irradiated mouse livers revealed that irradiation did not alter the expression of most of the included genes. These results suggest that glycomic screening of serum glycoproteins using lectin microarrays can be a powerful tool for identifying radiation-induced changes in the post-translational addition of sugar moieties to proteins. In addition, the results indicate that altered sialylation of glycoproteins may be an initial response to acute radiation exposure.Entities:
Keywords: adipsin; glycosylation; lectin array; sialic acid; sialyltransferase
Mesh:
Substances:
Year: 2019 PMID: 30521038 PMCID: PMC6430252 DOI: 10.1093/jrr/rry100
Source DB: PubMed Journal: J Radiat Res ISSN: 0449-3060 Impact factor: 2.724
Primer pairs for quantitative reverse transcription–polymerase chain reaction
| Gene name | Protein name | Primera | |
|---|---|---|---|
| ST3 β-galactoside α-2,3-sialyltransferase 1 | Forward | GACAGTCCACAACGCTCTGA | |
| Reverse | CCCATACGAGGAGTCCTTCA | ||
| ST3 β-galactoside α-2,3-sialyltransferase 2 | Forward | CCCTGCTCTTCACCTACTCG | |
| Reverse | GTCCAGACGGGTGAGATGTT | ||
| ST3 β-galactoside α-2,3-sialyltransferase 3 | Forward | CTCGGCTGTCCCCGCTATTC | |
| Reverse | ACATGACCGCAGCAGAGAGG | ||
| ST3 β-galactoside α-2,3-sialyltransferase 4 | Forward | CGATGGACTTCCACTGGATT | |
| Reverse | GCAGAGGTGTAGAGCCAAGG | ||
| ST3 β-galactoside α-2,3-sialyltransferase 5 | Forward | TCAAGTGGCTTCAAGCAATG | |
| Reverse | GTAGCCAAGACAACGGCAAT | ||
| ST3 β-galactoside α-2,3-sialyltransferase 6 | Forward | GTGAAGTGCACCTCGCTGG | |
| Reverse | AGCTGCTCTGCAGTCAGATTGTG | ||
| β-galactoside α-2,6- sialyltransferase 1 | Forward | TGTGGGCACAAAAACTACCA | |
| Reverse | CTGGGGCTTGAGGATGTAAA | ||
| glyceraldehyde-3-phosphate dehydrogenase | Forward | GTCAGCAATGCATCCTGCA | |
| Reverse | GTGGTCATGAGCCCTTCCA |
aSequences are written in the 5′ to 3′ direction.
bThese primer sequences were first reported in Kwon et al., PLoS One 2014 [40].
Fig. 1.Representative western blot of adipsin from the serum of mice irradiated with (A) 0.25 Gy or (B) 4 Gy of γ-rays. Each lane corresponds to an individual sample (two animals per experimental condition). Serum samples were collected at the indicated times after irradiation. Arrowheads identify deglycosylated adipsin.
Comparison of the levels (reported as intensities) of lectins bound to serum glycoproteins in mice at 24 h after irradiation with 6 Gy of γ-rays and with those in untreated controls
| Lectin | Control | 24 h after irradiation with 6 Gy of γ-rays | Fold changec |
| Reported specificitye | ||||
|---|---|---|---|---|---|---|---|---|---|
| Average | SDa | CVb | Average | SD | CV | ||||
| MAL_I | 39.55 | 2.62 | 0.066 | 53.20 | 0.57 | 0.011 | 1.35 | 0.019 | Siaα2–3Galβ1–4GlcNAc |
| DSA | 366.50 | 34.65 | 0.095 | 412.50 | 12.02 | 0.029 | 1.13 | 0.218 | (GlcNAcβ1–4)n, Galβ1–4GlcNAc |
| LTL | 1.11 | 0.08 | 0.076 | 1.24 | 0.11 | 0.086 | 1.12 | 0.323 | Fucα1–6GlcNAc, Fucα1–3(Galβ1–4)GlcNAc |
| PHA(E) | 214.00 | 7.07 | 0.033 | 237.00 | 19.80 | 0.084 | 1.11 | 0.262 | bi-antennary complex-type N-glycan with outer Gal and bisecting GlcNAc |
| LEL | 389.50 | 27.58 | 0.071 | 415.00 | 7.07 | 0.017 | 1.07 | 0.333 | GlcNAc trimers/tetramers |
| STL | 384.50 | 0.71 | 0.002 | 398.50 | 6.36 | 0.016 | 1.04 | 0.091 | GlcNAc oligomers, oligosaccharide containing GlcNAc and MurNAc |
| Calsepa | 194.00 | 7.07 | 0.036 | 201.50 | 12.02 | 0.060 | 1.04 | 0.526 | Mannose, maltose |
| SSA | 595.50 | 3.54 | 0.006 | 565.00 | 7.07 | 0.013 | 0.95 | 0.032 | Siaα2–6Gal/GalNAc |
| SNA | 610.00 | 8.49 | 0.014 | 558.50 | 13.44 | 0.024 | 0.92 | 0.044 | Siaα2–6Gal/GalNAc |
| TJA-I | 1009.00 | 43.84 | 0.043 | 910.00 | 60.81 | 0.067 | 0.90 | 0.203 | Siaα2–6Gal/GalNAc |
Note. The lectins listed above satisfied a coefficient of variation of <0.1. aStandard deviation. bCoefficient of variation. cRatio of the average intensity values for mouse serum obtained 24 h after 6 Gy of whole-body γ-irradiation relative to that of the corresponding control. dStudent’s t-test. eThis information was found in the manufacturer’s documentation.
Fig. 2.Expression of genes associated with sialyltransferases in the mouse liver (four animals per experimental condition) after whole-body irradiation. St3gal1, St3gal2, St3gal3, St3gal4, St3gal5, St3gal6 and St6gal1 expression was analyzed by quantitative reverse transcription–polymerase chain reaction. The relative expression of each gene was compared with the corresponding level in control mice. *P < 0.05; **P < 0.01.
Ten genes showed at least a 1.5-fold change in expression according to RT2 Profiler PCR Array analysis between control values and the values at 24 h after 4 Gy of mouse whole-body irradiation
| Ct valuea | Fold changeb | Gene name | ||
|---|---|---|---|---|
| Control | 24 h after 4 Gy of γ-irradiation | |||
| 31.34 | 30.55 | 1.92 | ST3 β-galactoside α-2,3-sialyltransferase 2 | |
| 24.54 | 23.96 | 1.66 | Protein- | |
| 27.58 | 27.02 | 1.64 | UDP- | |
| 27.85 | 27.37 | 1.55 | UDP-GlcNAc: β-Gal β-1,3-N-acetylglucosaminyltransferase 3 | |
| 23.32 | 22.86 | 1.54 | β-galactoside α-2,6 sialyltransferase 1 | |
| 26.61 | 26.15 | 1.53 | Mannoside acetylglucosaminyltransferase 5 | |
| 30.63 | 31.41 | 0.65 | UDP- | |
| 32.52 | 33.60 | 0.53 | Williams–Beuren syndrome chromosome region 17 homolog (human) | |
| 32.30 | 33.84 | 0.38 | Mannoside acetylglucosaminyltransferase 3 | |
| 32.81 | 34.51 | 0.34 | UDP- | |
aThreshold cycle value. bRatio of the relative expression value (2–ΔΔCT) of ‘24 h after 4 Gy irradiation’ to that of ‘control’.
Fig. 3.RT2 profiler PCR array analysis of glycosylation-related gene expression. A scatter plot comparing the expression of 84 liver genes from mice irradiated with 4 Gy of γ-rays with that in the corresponding controls. Solid triangles identify genes with at least a 1.5-fold change in expression after irradiation. The central line indicates unchanged gene expression, and boundaries represent the 1.5-fold cut-off value for the change in expression.