| Literature DB >> 30519512 |
Wei-Hao Lin1,2, Hsing-Chun Shih2, Chuen-Fu Lin3, Cheng-Yao Yang4, Yung-Fu Chang5, Chao-Nan Lin1,2, Ming-Tang Chiou1,2,6.
Abstract
BACKGROUND: Haemophilus parasuis is the etiological agent of Glässer's disease, and causes severe economic losses in the swine industry. Serovar classification is intended as an indicator of virulence and pathotype and is also crucial for vaccination programs and vaccine development. According to a polysaccharide biosynthesis locus analysis, H. parasuis isolates could be classified by a molecular serotyping assay except serovars 5 and 12 detected by the same primer pair. The aim of this study was to identify H. parasuis isolates from diseased pigs in Taiwan by using a molecular serotyping assay and to analyze the relationship between serovars and pathological patterns.Entities:
Keywords: Glässer’s disease; Haemophilus parasuis; Polyserositis; Serotyping
Year: 2018 PMID: 30519512 PMCID: PMC6275120 DOI: 10.7717/peerj.6017
Source DB: PubMed Journal: PeerJ ISSN: 2167-8359 Impact factor: 2.984
Figure 1Distribution of Haemophilus parasuis serovars according to lesion pattern.
Serositis only: animals were diagnosed with H. parasuis positive serosal lesions. Pulmonary lesion only: animals were diagnosed with H. parasuis positive pulmonary lesions. Data were analyzed by Fisher’s exact test and variables were considered significant at a 0.05 level (two-sided).
Figure 2Haemophilus parasuis isolation proportion of 204 lesions of 108 pathological diagnosed cases.
Fisher’s exact test was used to compare the frequency of H. parasuis isolation lesions. P-value < 0.05 was considered a significant difference.
Figure 3Molecular serotyping results with or without sequence results for 133 Haemophilus parasuis isolates.
Product size by molecular serotyping assay.
| Gene | Serovar | Product size in the original publication (bp) | Product size (bp) predicted by BLAST | Aligned sequence accession number | Product size (bp) measured by Bio-1D software | Product size (bp) according to sequence |
|---|---|---|---|---|---|---|
| 1 | 180 | 183 | 184 | 183 | ||
| 2 | 295 | 294 | N/A | N/A | ||
| 3 | 610 | 618 | N/A | N/A | ||
| 4 | 320 | 349 | 350 | 349 | ||
| 5 or 12 | 450 | 468 | 469 | 468 | ||
| 6 | 360 | 378 | N/A | N/A | ||
| 7 | 490 | 499 | N/A | N/A | ||
| 8 | 650 | 634 | N/A | N/A | ||
| 9 | 710 | 676 | 675 | 676 | ||
| 10 | 790 | 784 | N/A | N/A | ||
| 11 | 890 | 883 | N/A | N/A | ||
| 13 | 840 | 836 | N/A | N/A | ||
| 14 | 730 | 710 | 708 | 710 | ||
| 15 | 550 | 550 | N/A | N/A | ||
| HPS_219690793 | All | 275 | 276 | 276 | 276 |
Note:
This serovar was not detected in this study.
Unexpected products of serotyping multiplex PCR.
| Molecular serotyping non-typable isolate | Serovar according to sequence | Product size (bp) measured by Bio-1D software | Product size (bp) according to sequence | Amplified primer |
|---|---|---|---|---|
| Group 1 | Unknown | None | None | None |
| Group 2 | Serovar 13 | 300 | 297 | S13F, S14R |
| 830 | 836 | S13 | ||
| 1000 | N/A | N/A | ||
| Group 3 | Serovar 7 | 500 | 499 | S7 |
| 660 | N/A | N/A | ||
| Group 4 | Serovar 13 | 300 | 297 | S13F, S14R |
Notes:
Serovar could not be defined without any serovar-specific product sequence result.
There was no serovar-specific product.
Cloning of serovar-specific product was failed.