Literature DB >> 30515675

Next-generation sequencing-based clinical sequencing: toward precision medicine in solid tumors.

Toshifumi Wakai1, Pankaj Prasoon2, Yuki Hirose2, Yoshifumi Shimada2, Hiroshi Ichikawa2, Masayuki Nagahashi2.   

Abstract

Numerous technical and functional advances in next-generation sequencing (NGS) have led to the adoption of this technique in conventional clinical practice. Recently, large-scale genomic research and NGS technological innovation have revealed many more details of somatic and germline mutations in solid tumors. This development is allowing for the classification of tumor type sub-categories based on genetic alterations in solid tumors, and based on this information, new drugs and targeted therapies are being administered to patients. This has largely been facilitated by gene panel testing, which allows for a better understanding of the genetic basis for an individual's response to therapy. NGS-based comprehensive gene panel testing is a clinically useful approach to investigate genomic mechanisms, including therapy-related signaling pathways, microsatellite instability, hypermutated phenotypes, and tumor mutation burden. In this review, we describe the concept of precision medicine in solid tumors using NGS-based comprehensive gene panel testing, as well as the importance of quality control of tissue sample handling in routine NGS-based genomic testing, and we discuss issues for the future adoption of this technique in Japan.

Entities:  

Keywords:  Genomic panel test; Hypermutation; Next-generation sequencing; Precision medicine; Solid tumors; Tumor mutation burden

Mesh:

Substances:

Year:  2018        PMID: 30515675     DOI: 10.1007/s10147-018-1375-3

Source DB:  PubMed          Journal:  Int J Clin Oncol        ISSN: 1341-9625            Impact factor:   3.402


  53 in total

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Review 10.  Microsatellite instability and immune checkpoint inhibitors: toward precision medicine against gastrointestinal and hepatobiliary cancers.

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