Literature DB >> 30512944

Triangular DNA Origami Tilings.

Grigory Tikhomirov1, Philip Petersen2, Lulu Qian1,3.   

Abstract

DNA origami tilings provide methods for creating complex molecular patterns and shapes using flat DNA origami structures as building blocks. Square tiles have been developed to construct micrometer-scale arrays and to generate patterns using stochastic or deterministic strategies. Here we show triangular tiles as a complementary approach for enriching the design space of DNA tilings and for extending the shape of the self-assembled arrays from 2D to 3D. We introduce a computational approach for maximizing binding specificity in a fully symmetric tile design, with which we construct a 20-tile structure resembling a rhombic triacontahedron. We demonstrate controlled transition between 3D and 2D structures using simple methods including tile concentration, magnesium, and fold symmetry in tile edge design. Using these approaches, we construct 2D arrays with unbounded and designed sizes. The programmability of the edge design and the flexibility of the structure make the triangular DNA origami tile an ideal building block for complex self-assembly and reconfiguration in artificial molecular machines and fabricated nanodevices.

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Year:  2018        PMID: 30512944     DOI: 10.1021/jacs.8b10609

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  5 in total

1.  Tiling a tubule: how increasing complexity improves the yield of self-limited assembly.

Authors:  Thomas E Videbæk; Huang Fang; Daichi Hayakawa; Botond Tyukodi; Michael F Hagan; W Benjamin Rogers
Journal:  J Phys Condens Matter       Date:  2022-01-14       Impact factor: 2.333

Review 2.  DNA Nanotechnology-Enabled Fabrication of Metal Nanomorphology.

Authors:  Mo Xie; Yang Hu; Jue Yin; Ziwei Zhao; Jing Chen; Jie Chao
Journal:  Research (Wash D C)       Date:  2022-06-14

3.  Synthesis of Ligand Functionalized ErbB-3 Targeted Novel DNA Nano-Threads Loaded with the Low Dose of Doxorubicin for Efficient In Vitro Evaluation of the Resistant Anti-Cancer Activity.

Authors:  Mirza Muhammad Faran Ashraf Baig; Wing-Fu Lai; Anam Ahsan; Mehreen Jabeen; Muhammad Asim Farooq; Reyaj Mikrani; Muhammad Abbas; Muhammad Naveed; Said Abasse Kassim; Faisal Raza; Afzal Ahmed Dar; Muhammad Tayyab Ansari
Journal:  Pharm Res       Date:  2020-03-30       Impact factor: 4.200

Review 4.  Advances in intracellular delivery through supramolecular self-assembly of oligonucleotides and peptides.

Authors:  Jeonghwan Kim; Ashwanikumar Narayana; Siddharth Patel; Gaurav Sahay
Journal:  Theranostics       Date:  2019-05-18       Impact factor: 11.556

5.  Hierarchical two-dimensional molecular assembly through dynamic combination of conformational states at the liquid/solid interface.

Authors:  Matsuhiro Maeda; Ruri Nakayama; Steven De Feyter; Yoshito Tobe; Kazukuni Tahara
Journal:  Chem Sci       Date:  2020-08-06       Impact factor: 9.825

  5 in total

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