Literature DB >> 30511202

The peculiar genetics of the ribosomal DNA blurs the boundaries of transgenerational epigenetic inheritance.

Farah Bughio1,2, Keith A Maggert3,4.   

Abstract

Our goal is to draw a line-hypothetical in its totality but experimentally supported at each individual step-connecting the ribosomal DNA and the phenomenon of transgenerational epigenetic inheritance of induced phenotypes. The reasonableness of this hypothesis is offset by its implication, that many (or most) (or all) of the cases of induced-and-inherited phenotypes that are seen to persist for generations are instead unmapped induced polymorphisms in the ribosomal DNA, and thus are the consequence of the peculiar and enduringly fascinating genetics of the highly transcribed repeat DNA structure at that locus.

Entities:  

Keywords:  Epigenetics; Ribosomal DNA; rDNA

Mesh:

Substances:

Year:  2018        PMID: 30511202      PMCID: PMC6393165          DOI: 10.1007/s10577-018-9591-2

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  119 in total

1.  Molecular cytogenetic evidence to characterize breakpoint regions in Robertsonian translocations.

Authors:  S W Cheung; L Sun; T Featherstone
Journal:  Cytogenet Cell Genet       Date:  1990

2.  A new role of the rDNA and nucleolus in the nucleus--rDNA instability maintains genome integrity.

Authors:  Takehiko Kobayashi
Journal:  Bioessays       Date:  2008-03       Impact factor: 4.345

Review 3.  The epigenetics of rRNA genes: from molecular to chromosome biology.

Authors:  Brian McStay; Ingrid Grummt
Journal:  Annu Rev Cell Dev Biol       Date:  2008       Impact factor: 13.827

Review 4.  Epigenetic regulation of heterochromatic DNA stability.

Authors:  Jamy C Peng; Gary H Karpen
Journal:  Curr Opin Genet Dev       Date:  2008-03-26       Impact factor: 5.578

Review 5.  Nutriepigenomics: the role of nutrition in epigenetic control of human diseases.

Authors:  Marlene Remely; Barbara Stefanska; Luca Lovrecic; Ulrich Magnet; Alexander G Haslberger
Journal:  Curr Opin Clin Nutr Metab Care       Date:  2015-07       Impact factor: 4.294

6.  Rex and a suppressor of Rex are repeated neomorphic loci in the Drosophila melanogaster ribosomal DNA.

Authors:  R S Rasooly; L G Robbins
Journal:  Genetics       Date:  1991-09       Impact factor: 4.562

7.  Genomic architecture and inheritance of human ribosomal RNA gene clusters.

Authors:  Dawn M Stults; Michael W Killen; Heather H Pierce; Andrew J Pierce
Journal:  Genome Res       Date:  2007-11-19       Impact factor: 9.043

8.  A two-stage model for the control of rDNA magnification.

Authors:  R S Hawley; K D Tartof
Journal:  Genetics       Date:  1985-04       Impact factor: 4.562

9.  NOPdb: Nucleolar Proteome Database--2008 update.

Authors:  Yasmeen Ahmad; François-Michel Boisvert; Peter Gregor; Andy Cobley; Angus I Lamond
Journal:  Nucleic Acids Res       Date:  2008-11-04       Impact factor: 16.971

10.  Telomere and ribosomal DNA repeats are chromosomal targets of the bloom syndrome DNA helicase.

Authors:  James Schawalder; Enesa Paric; Norma F Neff
Journal:  BMC Cell Biol       Date:  2003-10-27       Impact factor: 4.241

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  5 in total

1.  Human rDNA copy number is unstable in metastatic breast cancers.

Authors:  Virginia Valori; Katalin Tus; Christina Laukaitis; David T Harris; Lauren LeBeau; Keith A Maggert
Journal:  Epigenetics       Date:  2019-08-12       Impact factor: 4.528

2.  Genetic variation at mouse and human ribosomal DNA influences associated epigenetic states.

Authors:  Francisco Rodriguez-Algarra; Robert A E Seaborne; Amy F Danson; Selin Yildizoglu; Harunori Yoshikawa; Pui Pik Law; Zakaryya Ahmad; Victoria A Maudsley; Ama Brew; Nadine Holmes; Mateus Ochôa; Alan Hodgkinson; Sarah J Marzi; Madapura M Pradeepa; Matthew Loose; Michelle L Holland; Vardhman K Rakyan
Journal:  Genome Biol       Date:  2022-02-14       Impact factor: 13.583

Review 3.  Integrative rDNAomics-Importance of the Oldest Repetitive Fraction of the Eukaryote Genome.

Authors:  Radka Symonová
Journal:  Genes (Basel)       Date:  2019-05-07       Impact factor: 4.096

4.  The Utility of Graph Clustering of 5S Ribosomal DNA Homoeologs in Plant Allopolyploids, Homoploid Hybrids, and Cryptic Introgressants.

Authors:  Sònia Garcia; Jonathan F Wendel; Natalia Borowska-Zuchowska; Malika Aïnouche; Alena Kuderova; Ales Kovarik
Journal:  Front Plant Sci       Date:  2020-02-10       Impact factor: 5.753

5.  Challenges and Approaches to Genotyping Repetitive DNA.

Authors:  Elizabeth A Morton; Ashley N Hall; Elizabeth Kwan; Calvin Mok; Konstantin Queitsch; Vivek Nandakumar; John Stamatoyannopoulos; Bonita J Brewer; Robert Waterston; Christine Queitsch
Journal:  G3 (Bethesda)       Date:  2020-01-07       Impact factor: 3.154

  5 in total

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