Literature DB >> 30508494

Mechanisms of Cotranslational Maturation of Newly Synthesized Proteins.

Günter Kramer1, Ayala Shiber1, Bernd Bukau1.   

Abstract

The timely production of functional proteins is of critical importance for the biological activity of cells. To reach the functional state, newly synthesized polypeptides have to become enzymatically processed, folded, and assembled into oligomeric complexes and, for noncytosolic proteins, translocated across membranes. Key activities of these processes occur cotranslationally, assisted by a network of machineries that transiently engage nascent polypeptides at distinct phases of translation. The sequence of events is tuned by intrinsic features of the nascent polypeptides and timely association of factors with the translating ribosome. Considering the dynamics of translation, the heterogeneity of cellular proteins, and the diversity of interaction partners, it is a major cellular achievement that these processes are temporally and spatially so precisely coordinated, minimizing the generation of damaged proteins. This review summarizes the current progress we have made toward a comprehensive understanding of the cotranslational interactions of nascent chains, which pave the way to their functional state.

Keywords:  assembly; chaperones; protein folding; ribosomes; translation

Mesh:

Substances:

Year:  2018        PMID: 30508494     DOI: 10.1146/annurev-biochem-013118-111717

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  48 in total

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Authors:  Meta Heidenreich; Joseph M Georgeson; Emanuele Locatelli; Lorenzo Rovigatti; Saroj Kumar Nandi; Avital Steinberg; Yotam Nadav; Eyal Shimoni; Samuel A Safran; Jonathan P K Doye; Emmanuel D Levy
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3.  Codon Resolution Analysis of Ribosome Profiling Data.

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Journal:  Methods Mol Biol       Date:  2021

4.  Protein Synthesis in the Developing Neocortex at Near-Atomic Resolution Reveals Ebp1-Mediated Neuronal Proteostasis at the 60S Tunnel Exit.

Authors:  Matthew L Kraushar; Ferdinand Krupp; Dermot Harnett; Paul Turko; Mateusz C Ambrozkiewicz; Thiemo Sprink; Koshi Imami; Manuel Günnigmann; Ulrike Zinnall; Carlos H Vieira-Vieira; Theres Schaub; Agnieszka Münster-Wandowski; Jörg Bürger; Ekaterina Borisova; Hiroshi Yamamoto; Mladen-Roko Rasin; Uwe Ohler; Dieter Beule; Thorsten Mielke; Victor Tarabykin; Markus Landthaler; Günter Kramer; Imre Vida; Matthias Selbach; Christian M T Spahn
Journal:  Mol Cell       Date:  2020-12-22       Impact factor: 17.970

5.  Effect of Protein Structure on Evolution of Cotranslational Folding.

Authors:  Victor Zhao; William M Jacobs; Eugene I Shakhnovich
Journal:  Biophys J       Date:  2020-08-12       Impact factor: 4.033

6.  C-terminal tail length guides insertion and assembly of membrane proteins.

Authors:  Sha Sun; Malaiyalam Mariappan
Journal:  J Biol Chem       Date:  2020-09-02       Impact factor: 5.157

7.  Synonymous codon substitutions perturb cotranslational protein folding in vivo and impair cell fitness.

Authors:  Ian M Walsh; Micayla A Bowman; Iker F Soto Santarriaga; Anabel Rodriguez; Patricia L Clark
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-03       Impact factor: 11.205

8.  Timing and specificity of cotranslational nascent protein modification in bacteria.

Authors:  Chien-I Yang; Hao-Hsuan Hsieh; Shu-Ou Shan
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-30       Impact factor: 11.205

9.  Selective ribosome profiling to study interactions of translating ribosomes in yeast.

Authors:  Carla V Galmozzi; Dorina Merker; Ulrike A Friedrich; Kristina Döring; Günter Kramer
Journal:  Nat Protoc       Date:  2019-07-22       Impact factor: 13.491

10.  RiboDiPA: a novel tool for differential pattern analysis in Ribo-seq data.

Authors:  Keren Li; C Matthew Hope; Xiaozhong A Wang; Ji-Ping Wang
Journal:  Nucleic Acids Res       Date:  2020-12-02       Impact factor: 16.971

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