Literature DB >> 30505140

RemBrain: Exploring Dynamic Biospatial Networks with Mosaic Matrices and Mirror Glyphs.

Chihua Ma1, Filippo Pellolio2, Daniel A Llano3, Kevin Ambrose Stebbings4, Robert V Kenyon1, G Elisabeta Marai1.   

Abstract

We introduce a web-based visual comparison approach for the systematic exploration of dynamic activation networks across biological datasets. Understanding the dynamics of such networks in the context of demographic factors like age is a fundamental problem in computational systems biology and neuroscience. We design visual encodings for the dynamic and community characteristics of these temporal networks. Our multi-scale approach blends nested mosaic matrices that capture temporal characteristics of the data, spatial views of the network data, Kiviat diagrams and mirror glyphs that detail the temporal behavior and community assignment of specific nodes. A top design specifically targeted at pairwise visual comparison further supports the comparative analysis of multiple dataset activations. We demonstrate the effectiveness of this approach through a case study on mouse brain network data. Domain expert feedback indicates this approach can help identify trends and anomalies in the data.

Entities:  

Year:  2017        PMID: 30505140      PMCID: PMC6261497          DOI: 10.2352/J.ImagingSci.Technol.2017.61.6.060404

Source DB:  PubMed          Journal:  J Imaging Sci Technol        ISSN: 1062-3701            Impact factor:   0.400


  21 in total

1.  NeuroBlocks--Visual Tracking of Segmentation and Proofreading for Large Connectomics Projects.

Authors:  Ali K Ai-Awami; Johanna Beyer; Daniel Haehn; Narayanan Kasthuri; Jeff W Lichtman; Hanspeter Pfister; Markus Hadwiger
Journal:  IEEE Trans Vis Comput Graph       Date:  2016-01       Impact factor: 4.579

2.  NeuroLines: A Subway Map Metaphor for Visualizing Nanoscale Neuronal Connectivity.

Authors:  Ali K Al-Awami; Johanna Beyer; Hendrik Strobelt; Narayanan Kasthuri; Jeff W Lichtman; Hanspeter Pfister; Markus Hadwiger
Journal:  IEEE Trans Vis Comput Graph       Date:  2014-12       Impact factor: 4.579

3.  Large-Scale Overlays and Trends: Visually Mining, Panning and Zooming the Observable Universe.

Authors:  Timothy Basil Luciani; Brian Cherinka; Daniel Oliphant; Sean Myers; W Michael Wood-Vasey; Alexandros Labrinidis; G Elisabeta Marai
Journal:  IEEE Trans Vis Comput Graph       Date:  2014-07       Impact factor: 4.579

4.  MatrixExplorer: a dual-representation system to explore social networks.

Authors:  Nathalie Henry; Jean-Daniel Fekete
Journal:  IEEE Trans Vis Comput Graph       Date:  2006 Sep-Oct       Impact factor: 4.579

5.  NodeTrix: a hybrid visualization of social networks.

Authors:  Nathalie Henry; Jean-Daniel Fekete; Michael J McGuffin
Journal:  IEEE Trans Vis Comput Graph       Date:  2007 Nov-Dec       Impact factor: 4.579

6.  Three-dimensional mean-shift edge bundling for the visualization of functional connectivity in the brain.

Authors:  Joachim Böttger; Alexander Schäfer; Gabriele Lohmann; Arno Villringer; Daniel S Margulies
Journal:  IEEE Trans Vis Comput Graph       Date:  2014-03       Impact factor: 4.579

7.  Online dynamic graph drawing.

Authors:  Yaniv Frishman; Ayellet Tal
Journal:  IEEE Trans Vis Comput Graph       Date:  2008 Jul-Aug       Impact factor: 4.579

8.  Dynamic functional connectivity using state-based dynamic community structure: method and application to opioid analgesia.

Authors:  Lucy F Robinson; Lauren Y Atlas; Tor D Wager
Journal:  Neuroimage       Date:  2014-12-20       Impact factor: 6.556

9.  Similar but Different: Dynamic Social Network Analysis Highlights Fundamental Differences between the Fission-Fusion Societies of Two Equid Species, the Onager and Grevy's Zebra.

Authors:  Daniel I Rubenstein; Siva R Sundaresan; Ilya R Fischhoff; Chayant Tantipathananandh; Tanya Y Berger-Wolf
Journal:  PLoS One       Date:  2015-10-21       Impact factor: 3.240

10.  The Connectome Visualization Utility: software for visualization of human brain networks.

Authors:  Roan A LaPlante; Linda Douw; Wei Tang; Steven M Stufflebeam
Journal:  PLoS One       Date:  2014-12-01       Impact factor: 3.240

View more
  2 in total

1.  Cohort-based T-SSIM Visual Computing for Radiation Therapy Prediction and Exploration.

Authors:  A Wentzel; P Hanula; T Luciani; B Elgohari; H Elhalawani; G Canahuate; D Vock; C D Fuller; G E Marai
Journal:  IEEE Trans Vis Comput Graph       Date:  2019-08-22       Impact factor: 4.579

2.  A Tale of Two Centers: Visual Exploration of Health Disparities in Cancer Care.

Authors:  Sanjana Srabanti; Michael Tran; Virginie Achim; David Fuller; Guadalupe Canahuate; Fabio Miranda; G Elisabeta Marai
Journal:  IEEE Pac Vis Symp       Date:  2022-06-08
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.