Literature DB >> 30504211

Molecular Adaptations of Bacterial Mercuric Reductase to the Hypersaline Kebrit Deep in the Red Sea.

Eman Ramadan1, Mohamad Maged1, Ahmed El Hosseiny1, Felipe S Chambergo2, João C Setubal3, Hamza El Dorry4.   

Abstract

The hypersaline Kebrit Deep brine pool in the Red Sea is characterized by high levels of toxic heavy metals. Here, we describe two structurally related mercuric reductases (MerAs) from this site which were expressed in Escherichia coli Sequence similarities suggest that both genes are derived from proteobacteria, most likely the Betaproteobacteria or Gammaproteobacteria We show that one of the enzymes (K35NH) is strongly inhibited by NaCl, while the other (K09H) is activated in a NaCl-dependent manner. We infer from this difference that the two forms might support the detoxification of mercury in bacterial microorganisms that employ the compatible solutes and salt-in strategies, respectively. Three-dimensional structure modeling shows that all amino acid substitutions unique to each type are located outside the domain responsible for formation of the active MerA homodimer, and the vast majority of these are found on the surface of the molecule. Moreover, K09H exhibits the predominance of acidic over hydrophobic side chains that is typical of halophilic salt-dependent proteins. These findings enhance our understanding of how selection pressures imposed by two environmental stressors have endowed MerA enzymes with catalytic properties that can potentially function in microorganisms that utilize distinct mechanisms for osmotic balance in hypersaline environments.IMPORTANCE Analysis of two structurally homologous but catalytically distinct mercuric reductases from the Kebrit Deep brine in the Red Sea sheds light on the adaptations that enable microorganisms to cope simultaneously with extreme salinity and toxic mercury compounds. One is strongly inhibited by high NaCl concentrations, while the other exhibits NaCl-dependent activation. Their different activity profiles imply that they may derive from bacterial microorganisms that utilize compatible solutes and salt-in strategies, respectively, to maintain osmotic balance. Three-dimensional modeling reveals that regions not involved in formation of the active homodimer are conserved between the two. However, in the NaCl-dependent form, distinct amino acid substitutions are found in areas that are critical for stability in high salt. The work provides insights into how two environmental stressors have shaped the structure of orthologous enzymes through selection and adaptation, enabling them to retain their catalytic function in what may be very different cellular contexts.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  Atlantis II Deep; Kebrit Deep; Red Sea brine pools; mercuric reductase

Mesh:

Substances:

Year:  2019        PMID: 30504211      PMCID: PMC6365835          DOI: 10.1128/AEM.01431-18

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  42 in total

1.  SWISS-MODEL: An automated protein homology-modeling server.

Authors:  Torsten Schwede; Jürgen Kopp; Nicolas Guex; Manuel C Peitsch
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

2.  The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling.

Authors:  Konstantin Arnold; Lorenza Bordoli; Jürgen Kopp; Torsten Schwede
Journal:  Bioinformatics       Date:  2005-11-13       Impact factor: 6.937

Review 3.  Putative biological roles of hydrogen sulfide in health and disease: a breath of not so fresh air?

Authors:  L Li; P K Moore
Journal:  Trends Pharmacol Sci       Date:  2008-01-03       Impact factor: 14.819

Review 4.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

5.  Unique amino acid composition of proteins in halophilic bacteria.

Authors:  Satoshi Fukuchi; Kazuaki Yoshimune; Mamoru Wakayama; Mitsuaki Moriguchi; Ken Nishikawa
Journal:  J Mol Biol       Date:  2003-03-21       Impact factor: 5.469

Review 6.  Bioenergetic aspects of halophilism.

Authors:  A Oren
Journal:  Microbiol Mol Biol Rev       Date:  1999-06       Impact factor: 11.056

7.  Community analysis of a mercury hot spring supports occurrence of domain-specific forms of mercuric reductase.

Authors:  Jessica Simbahan; Elizabeth Kurth; James Schelert; Amanda Dillman; Etsuko Moriyama; Stevan Jovanovich; Paul Blum
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

8.  Microbial diversity of the brine-seawater interface of the Kebrit Deep, Red Sea, studied via 16S rRNA gene sequences and cultivation methods.

Authors:  W Eder; L L Jahnke; M Schmidt; R Huber
Journal:  Appl Environ Microbiol       Date:  2001-07       Impact factor: 4.792

9.  Insights into protein adaptation to a saturated salt environment from the crystal structure of a halophilic 2Fe-2S ferredoxin.

Authors:  F Frolow; M Harel; J L Sussman; M Mevarech; M Shoham
Journal:  Nat Struct Biol       Date:  1996-05

10.  Microbial life at high salt concentrations: phylogenetic and metabolic diversity.

Authors:  Aharon Oren
Journal:  Saline Systems       Date:  2008-04-15
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