Literature DB >> 30503746

Comparative mitogenome analysis of three species and monophyletic inference of Catantopinae (Orthoptera: Acridoidea).

Ran Li1, Xiaohan Shu1, Xiaodong Li2, Ling Meng1, Baoping Li3.   

Abstract

To enrich the genomic database of Catantopinae (Orthoptera: Acrididae), mitogenomes of three species from different genera, Traulia nigritibialis (15,701 bp), Choroedocus capensis (16,293 bp) and Stenocatantops splendens (15,574 bp), were characterized and compared with those of other grasshoppers in the subfamily. All 13 protein-coding genes (PCGs) were initiated by ATN codons except COI with ACC (C. capensis and S.splendens) and ND6 with TTG (S. splendens). All transfer RNA (tRNA) genes had a typical clover-leaf structure, except tRNASer(AGN) in which the base pairs of the dihydrouridine (DHU) arm were reduced. The phylogenetic relationships were constructed among 22 species from four subfamiles of Acrididae by classical classifications based on two datasets of their mitogenomes using both Bayesian Inference (BI) and Maximum Likelihood (ML). The phylogenetic analysis confirmed the monophyly of the three other subfamilies, but did not provided support of the monophyly of Catantopinae.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Catantopinae; Mitochondrial genome; Orthoptera; Phylogenetic analysis

Mesh:

Substances:

Year:  2018        PMID: 30503746     DOI: 10.1016/j.ygeno.2018.11.027

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


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6.  Characterization and analysis of full-length transcriptomes from two grasshoppers, Gomphocerus licenti and Mongolotettix japonicus.

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  6 in total

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