Literature DB >> 30502621

Coupling efficiency of secondary active transporters.

Ryan K Henderson1, Klaus Fendler2, Bert Poolman3.   

Abstract

Secondary active transporters are fundamental to a myriad of biological processes. They use the electrochemical gradient of one solute to drive transport of another solute against its concentration gradient. Central to this mechanism is that the transport of one does not occur in the absence of the other. However, like in most of biology, imperfections in the coupling mechanism exist and we argue that these are innocuous and may even be beneficial for the cell. We discuss the energetics and kinetics of alternating-access in secondary transport and focus on the mechanistic aspects of imperfect coupling that give rise to leak pathways. Additionally, inspection of available transporter structures gives valuable insight into coupling mechanics, and we review literature where proteins have been altered to change their coupling efficiency.

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Year:  2018        PMID: 30502621     DOI: 10.1016/j.copbio.2018.11.005

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  13 in total

Review 1.  Computational Dissection of Membrane Transport at a Microscopic Level.

Authors:  Tao Jiang; Po-Chao Wen; Noah Trebesch; Zhiyu Zhao; Shashank Pant; Karan Kapoor; Mrinal Shekhar; Emad Tajkhorshid
Journal:  Trends Biochem Sci       Date:  2019-12-05       Impact factor: 13.807

Review 2.  Determining small-molecule permeation through lipid membranes.

Authors:  Jacopo Frallicciardi; Matteo Gabba; Bert Poolman
Journal:  Nat Protoc       Date:  2022-08-24       Impact factor: 17.021

Review 3.  Multiscale kinetic analysis of proteins.

Authors:  Jessica Mj Swanson
Journal:  Curr Opin Struct Biol       Date:  2021-12-16       Impact factor: 7.786

Review 4.  General principles of secondary active transporter function.

Authors:  Oliver Beckstein; Fiona Naughton
Journal:  Biophys Rev (Melville)       Date:  2022-03-29

5.  Dissection of Protonation Sites for Antibacterial Recognition and Transport in QacA, a Multi-Drug Efflux Transporter.

Authors:  Puja Majumder; Shashank Khare; Arunabh Athreya; Nazia Hussain; Ashutosh Gulati; Aravind Penmatsa
Journal:  J Mol Biol       Date:  2019-03-23       Impact factor: 5.469

Review 6.  Molecular Mechanism of Nramp-Family Transition Metal Transport.

Authors:  Aaron T Bozzi; Rachelle Gaudet
Journal:  J Mol Biol       Date:  2021-04-16       Impact factor: 6.151

7.  EmrE reminds us to expect the unexpected in membrane transport.

Authors:  Michael Grabe; Daniel M Zuckerman; John M Rosenberg
Journal:  J Gen Physiol       Date:  2020-01-06       Impact factor: 4.086

8.  Unique structural features in an Nramp metal transporter impart substrate-specific proton cotransport and a kinetic bias to favor import.

Authors:  Aaron T Bozzi; Lukas B Bane; Christina M Zimanyi; Rachelle Gaudet
Journal:  J Gen Physiol       Date:  2019-10-16       Impact factor: 4.086

9.  A kinetic mechanism for enhanced selectivity of membrane transport.

Authors:  Paola Bisignano; Michael A Lee; August George; Daniel M Zuckerman; Michael Grabe; John M Rosenberg
Journal:  PLoS Comput Biol       Date:  2020-07-02       Impact factor: 4.779

10.  A systems-biology approach to molecular machines: Exploration of alternative transporter mechanisms.

Authors:  August George; Paola Bisignano; John M Rosenberg; Michael Grabe; Daniel M Zuckerman
Journal:  PLoS Comput Biol       Date:  2020-07-02       Impact factor: 4.779

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