Literature DB >> 30499413

Structure-Based Virtual Screening for the Identification of High Affinity Compounds as Potent VEGFR2 Inhibitors for the Treatment of Renal Cell Carcinoma.

Khushboo Sharma1, Khushboo Patidar1, Meer Asif Ali1, Pravin Patil1, Himshikha Goud1, Tajamul Hussain2,3, Anuraj Nayarisseri1,4,5, Sanjeev Kumar Singh5.   

Abstract

INTRODUCTION: Renal Cell Carcinoma is a common type of renal cancer-causing deaths worldwide which is characterized by sustained angiogenesis. VEGF and its receptors play a major role in physiologic and pathologic angiogenesis, which is marked in tumour progression and metastasis development. Induction of VEGF genes occur due to hypoxic condition induced by tumour growth after a critical size in cancerous cell. Signal transduction networks originated by VEGFA/VEGFR2, (a notable ligand-receptor complex in the VEGF system) leads to major angiogenesis events ranging from endothelial cell proliferation, to new vessel formation, Furthermore, differential expression of VEGF-VEGFR mRNA also found in different types of RCC. AIM: The aim of present study is to inhibit the VEGFR2 protein by the action of certain inhibitors and then to search an efficient inhibitor.
MATERIALS AND METHODS: A total of 23 potential inhibitors were searched and used to target the protein using the concept of molecular docking. Among 23 inhibitors, CHEMBL346631 shows best affinity with the target protein and was used for high throughput virtual screening to find similar compounds. The compound obtained from virtual screeningSCHEMBL469307, shows much more better affinity with VEGFR2 than CHEMBL346631.
CONCLUSION: Relative study for both the compounds showed a minor difference in relevant properties. The compound SCHEMBL469307 have a high potential to inhibit the VGFR2 protein and can be backed for future studies in Renal Cell Carcinoma. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.net.

Entities:  

Keywords:  Cancer; Drug designing; Molecular docking; Renal cell carcinoma; VEGFR2; Virtual screening.

Mesh:

Substances:

Year:  2018        PMID: 30499413     DOI: 10.2174/1568026619666181130142237

Source DB:  PubMed          Journal:  Curr Top Med Chem        ISSN: 1568-0266            Impact factor:   3.295


  13 in total

1.  Topomer-CoMFA proposed as a tool to construct dual EGFR/HER-2 models.

Authors:  Heberth de Paula; Rafaela Molina Angelo; Kathia Maria Honorio
Journal:  J Mol Model       Date:  2021-08-07       Impact factor: 1.810

2.  Structure-Based Virtual Screening, Molecular Docking, and Molecular Dynamics Simulation of VEGF inhibitors for the clinical treatment of Ovarian Cancer.

Authors:  Sourav Mukherjee; Mohnad Abdalla; Manasi Yadav; Maddala Madhavi; Anushka Bhrdwaj; Ravina Khandelwal; Leena Prajapati; Aravind Panicker; Aashish Chaudhary; Ashraf Albrakati; Tajamul Hussain; Anuraj Nayarisseri; Sanjeev Kumar Singh
Journal:  J Mol Model       Date:  2022-03-24       Impact factor: 1.810

3.  Expression of VEGF, CD73 and their relationship with clinical pathology, microvessel density, and prognosis in renal cell carcinoma.

Authors:  Xuefeng Mei; Jia Shu; Ruizhen Huang; Xin Chu; Ying Tian
Journal:  Transl Androl Urol       Date:  2020-06

4.  Design of novel JAK3 Inhibitors towards Rheumatoid Arthritis using molecular docking analysis.

Authors:  Divya Jain; Trishang Udhwani; Shreshtha Sharma; Aishwarya Gandhe; Palugulla Bhaskar Reddy; Anuraj Nayarisseri; Sanjeev Kumar Singh
Journal:  Bioinformation       Date:  2019-02-28

5.  Design of PD-L1 inhibitors for lung cancer.

Authors:  Trishang Udhwani; Sourav Mukherjee; Khushboo Sharma; Jajoriya Sweta; Natasha Khandekar; Anuraj Nayarisseri; Sanjeev Kumar Singh
Journal:  Bioinformation       Date:  2019-02-28

6.  FLT3 inhibitor design using molecular docking based virtual screening for acute myeloid leukemia.

Authors:  Padmini Gokhale; Aashish Pratap Singh Chauhan; Anushka Arora; Natasha Khandekar; Anuraj Nayarisseri; Sanjeev Kumar Singh
Journal:  Bioinformation       Date:  2019-02-28

7.  Virtual Screening of IL-6 Inhibitors for Idiopathic Arthritis.

Authors:  Palak Shukla; Ravina Khandelwal; Diksha Sharma; Anindya Dhar; Anuraj Nayarisseri; Sanjeev Kumar Singh
Journal:  Bioinformation       Date:  2019-02-28

8.  Identification of High-Affinity Small Molecule Targeting IDH2 for the Clinical Treatment of Acute Myeloid Leukemia.

Authors:  Jajoriya Sweta; Ravina Khandelwal; Sivaraj Srinitha; Rashi Pancholi; Ritu Adhikary; Meer Asif Ali; Anuraj Nayarisseri; Sugunakar Vuree; Sanjeev Kumar Singh
Journal:  Asian Pac J Cancer Prev       Date:  2019-08-01

9.  Identification of Potent VEGF Inhibitors for the Clinical Treatment of Glioblastoma, A Virtual Screening Approach.

Authors:  Mohini Yadav; Ravina Khandelwal; Urvy Mudgal; Sivaraj Srinitha; Natasha Khandekar; Anuraj Nayarisseri; Sugunakar Vuree; Sanjeev Kumar Singh
Journal:  Asian Pac J Cancer Prev       Date:  2019-09-01

10.  Effect of Babao Dan on angiogenesis of gastric cancer in vitro by regulating VEGFA/VEGFR2 signaling pathway.

Authors:  Jian-Hua Guan; Zhi-Yun Cao; Bin Guan; Li-Hui Wei; Jun Peng; You-Qin Chen; Thomas Joseph Sferra; Senthilkumar Sankararaman; Zhi-Xue Zhan; Jiu-Mao Lin
Journal:  Transl Cancer Res       Date:  2021-02       Impact factor: 1.241

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