Literature DB >> 30497021

Rapid, real-time chemiluminescent detection of DNA mutation based on digital microfluidics and pyrosequencing.

Fenxiang Zou1, Qingyu Ruan1, Xiaoye Lin1, Mingxia Zhang1, Yanling Song2, Leiji Zhou1, Zhi Zhu1, Shuichao Lin1, Wei Wang2, Chaoyong James Yang3.   

Abstract

To explore genome mutation meaningfully, it is in urgent need to develop an automated and inexpensive platform for DNA mutation analysis. Digital microfluidics is a powerful platform for a broad range of applications due to the advantages of high automatization and low reagent consumption. Pyrosequencing enables DNA sequencing based on non-electrophoresis bioluminescence, which is suitable for rapid and sensitive analysis of short sequences. Herein, we describe a palmtop sequencing platform for automatic, real-time and portable analysis of DNA mutations, which is based on the pyrosequencing principle and implemented by digital microfluidics. The portable system can sequence a DNA template with up to 53 bp with 100% accuracy within 2 h. Mutation in the KRAS gene can be detected within 30 min with a LOD as low as 5% mutant level. Portable and accurate gender identification was further demonstrated by sequencing a short amelogenin fragment. With the advantages of portability, ease of use, high accuracy, and low cost, the palmtop sequencing platform shows great potential for portable genetic testing in a variety of circumstances.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Digital microfluidics; Gender identification; KRAS mutations detection; Pyrosequencing

Mesh:

Substances:

Year:  2018        PMID: 30497021     DOI: 10.1016/j.bios.2018.09.092

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  5 in total

1.  A fucosyltransferase inhibition assay using image-analysis and digital microfluidics.

Authors:  Laura M Y Leclerc; Guy Soffer; David H Kwan; Steve C C Shih
Journal:  Biomicrofluidics       Date:  2019-05-10       Impact factor: 2.800

Review 2.  Electrowetting-on-dielectric (EWOD): Current perspectives and applications in ensuring food safety.

Authors:  Snigdha Roy Barman; Imran Khan; Subhodeep Chatterjee; Subhajit Saha; Dukhyun Choi; Sangmin Lee; Zong-Hong Lin
Journal:  J Food Drug Anal       Date:  2020-12-15       Impact factor: 6.157

3.  All-in-One Digital Microfluidics System for Molecular Diagnosis with Loop-Mediated Isothermal Amplification.

Authors:  Siyi Hu; Yuhan Jie; Kai Jin; Yifan Zhang; Tianjie Guo; Qi Huang; Qian Mei; Fuqiang Ma; Hanbin Ma
Journal:  Biosensors (Basel)       Date:  2022-05-11

Review 4.  A Review of Optical Imaging Technologies for Microfluidics.

Authors:  Pan Zhou; Haipeng He; Hanbin Ma; Shurong Wang; Siyi Hu
Journal:  Micromachines (Basel)       Date:  2022-02-08       Impact factor: 2.891

5.  An ISFET Microarray Sensor System for Detecting the DNA Base Pairing.

Authors:  Peng Sun; Yongxin Cong; Ming Xu; Huaqing Si; Dan Zhao; Dongping Wu
Journal:  Micromachines (Basel)       Date:  2021-06-22       Impact factor: 2.891

  5 in total

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