Literature DB >> 30496039

RNA localization and transport.

Beat Suter1.   

Abstract

RNA localization serves numerous purposes from controlling development and differentiation to supporting the physiological activities of cells and organisms. After a brief introduction into the history of the study of mRNA localization I will focus on animal systems, describing in which cellular compartments and in which cell types mRNA localization was observed and studied. In recent years numerous novel localization patterns have been described, and countless mRNAs have been documented to accumulate in specific subcellular compartments. These fascinating revelations prompted speculations about the purpose of localizing all these mRNAs. In recent years experimental evidence for an unexpected variety of different functions has started to emerge. Aside from focusing on the functional aspects, I will discuss various ways of localizing mRNAs with a focus on the mechanism of active and directed transport on cytoskeletal tracks. Structural studies combined with imaging of transport and biochemical studies have contributed to the enormous recent progress, particularly in understanding how dynein/dynactin/BicD (DDB) dependent transport on microtubules works. This transport process actively localizes diverse cargo in similar ways to the minus end of microtubules and, at least in flies, also individual mRNA molecules. A sophisticated mechanism ensures that cargo loading licenses processive transport.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Developmental function; Dynein; Microtubule dependent transport; Physiological function; RNA transport; mRNA localization

Mesh:

Substances:

Year:  2018        PMID: 30496039     DOI: 10.1016/j.bbagrm.2018.08.004

Source DB:  PubMed          Journal:  Biochim Biophys Acta Gene Regul Mech        ISSN: 1874-9399            Impact factor:   4.490


  12 in total

1.  The Egalitarian binding partners Dynein light chain and Bicaudal-D act sequentially to link mRNA to the Dynein motor.

Authors:  Chandler H Goldman; Hannah Neiswender; Rajalakshmi Veeranan-Karmegam; Graydon B Gonsalvez
Journal:  Development       Date:  2019-08-09       Impact factor: 6.868

2.  DM3Loc: multi-label mRNA subcellular localization prediction and analysis based on multi-head self-attention mechanism.

Authors:  Duolin Wang; Zhaoyue Zhang; Yuexu Jiang; Ziting Mao; Dong Wang; Hao Lin; Dong Xu
Journal:  Nucleic Acids Res       Date:  2021-05-07       Impact factor: 16.971

Review 3.  Regulation of spatially restricted gene expression: linking RNA localization and phase separation.

Authors:  Liam C O'Connell; Kimberly L Mowry
Journal:  Biochem Soc Trans       Date:  2021-12-17       Impact factor: 5.407

Review 4.  Emerging Roles of RNA-Binding Proteins in Neurodevelopment.

Authors:  Amalia S Parra; Christopher A Johnston
Journal:  J Dev Biol       Date:  2022-06-10

5.  Optimal RNA binding by Egalitarian, a Dynein cargo adaptor, is critical for maintaining oocyte fate in Drosophila.

Authors:  Chandler H Goldman; Hannah Neiswender; Frederick Baker; Rajalakshmi Veeranan-Karmegam; Saurav Misra; Graydon B Gonsalvez
Journal:  RNA Biol       Date:  2021-04-27       Impact factor: 4.652

Review 6.  Structural Insights into RNA Dimerization: Motifs, Interfaces and Functions.

Authors:  Charles Bou-Nader; Jinwei Zhang
Journal:  Molecules       Date:  2020-06-23       Impact factor: 4.411

7.  L-bodies are RNA-protein condensates driving RNA localization in Xenopus oocytes.

Authors:  Christopher R Neil; Samantha P Jeschonek; Sarah E Cabral; Liam C O'Connell; Erin A Powrie; Jessica P Otis; Timothy R Wood; Kimberly L Mowry
Journal:  Mol Biol Cell       Date:  2021-10-06       Impact factor: 4.138

8.  Dynein light chain-dependent dimerization of Egalitarian is essential for maintaining oocyte fate in Drosophila.

Authors:  Hannah Neiswender; Chandler H Goldman; Rajalakshmi Veeranan-Karmegam; Graydon B Gonsalvez
Journal:  Dev Biol       Date:  2021-06-25       Impact factor: 3.148

Review 9.  Regulation of Germ Cell mRNPs by eIF4E:4EIP Complexes: Multiple Mechanisms, One Goal.

Authors:  Hayden P Huggins; Brett D Keiper
Journal:  Front Cell Dev Biol       Date:  2020-07-07

Review 10.  Patterning the Drosophila embryo: A paradigm for RNA-based developmental genetic regulation.

Authors:  Paul Lasko
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-06-15       Impact factor: 9.957

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