Literature DB >> 30488348

A capillary column packed with a zirconium(IV)-based organic framework for enrichment of endogenous phosphopeptides.

Haizhu Lin1,2,3, Hemei Chen1,2,3, Xi Shao1,2,3, Chunhui Deng4,5,6.   

Abstract

A zirconium(IV)-based metal organic framework (Zr-MOF) was deposited on polydopamine-coated silica microspheres to form microspheres of type SiO2@PDA@Zr-MOF. These were packed into capillary columns for enrichment of phosphopeptides. The column was off-line coupled to both matrix-assisted laser desorption/ionization time of flight mass spectrometry and LC-ESI-MS/MS. The method has a detection limit as low as 4 fmol of β-casein digest and a selectivity as high as 1:1000 (molar ratio of β-casein and BSA digest). It was applied to the analysis of human saliva. In total, 240 endogenous phosphopeptides were identified in only 25 μL human saliva. Graphical abstract A zirconium-based metal organic framework (Zr-MOF) was modified outside of polydopamine-coated silica microspheres to form microspheres named SiO2@PDA@Zr-MOF. Then they were packed in capillary columns for selective enrichment of phosphopeptides via interaction between Zr-O clusters and phosphate groups. The pre-concentration resulted in a better detection of phosphopeptides by mass spectrometry. Tris: Tris(hydroxymethyl)aminomethane; DMF: Dimethyl Formamide; Zr-MOF: Zirconium(IV)-organic framework; MOAC: Metal oxide affinity chromatography.

Entities:  

Keywords:  Human saliva; MALDI-TOF MS; MOF; Mass spectrometry; Metal oxide affinity chromatography; On-column enrichment; Phosphopeptide; Phosphoproteome; Polydopamine; Size exclusion effect

Mesh:

Substances:

Year:  2018        PMID: 30488348     DOI: 10.1007/s00604-018-3109-7

Source DB:  PubMed          Journal:  Mikrochim Acta        ISSN: 0026-3672            Impact factor:   5.833


  23 in total

1.  Development of an off-line capillary column IMAC phosphopeptide enrichment method for label-free phosphorylation relative quantification.

Authors:  Hyunwoo Choi; Sungjoon Lee; Chang-Duk Jun; Zee-Yong Park
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2011-08-31       Impact factor: 3.205

2.  A tissue-specific atlas of mouse protein phosphorylation and expression.

Authors:  Edward L Huttlin; Mark P Jedrychowski; Joshua E Elias; Tapasree Goswami; Ramin Rad; Sean A Beausoleil; Judit Villén; Wilhelm Haas; Mathew E Sowa; Steven P Gygi
Journal:  Cell       Date:  2010-12-23       Impact factor: 41.582

3.  Hydrophilic polydopamine-coated graphene for metal ion immobilization as a novel immobilized metal ion affinity chromatography platform for phosphoproteome analysis.

Authors:  Yinghua Yan; Zhifang Zheng; Chunhui Deng; Yan Li; Xiangmin Zhang; Pengyuan Yang
Journal:  Anal Chem       Date:  2013-08-26       Impact factor: 6.986

Review 4.  Tools for analyzing the phosphoproteome and other phosphorylated biomolecules: a review.

Authors:  Alexander Leitner; Martin Sturm; Wolfgang Lindner
Journal:  Anal Chim Acta       Date:  2011-07-19       Impact factor: 6.558

Review 5.  Development of the affinity materials for phosphorylated proteins/peptides enrichment in phosphoproteomics analysis.

Authors:  Zhi-Gang Wang; Nan Lv; Wen-Zhi Bi; Ji-Lin Zhang; Jia-Zuan Ni
Journal:  ACS Appl Mater Interfaces       Date:  2015-04-16       Impact factor: 9.229

6.  Dual-Metal Centered Zirconium-Organic Framework: A Metal-Affinity Probe for Highly Specific Interaction with Phosphopeptides.

Authors:  Jiaxi Peng; Hongyan Zhang; Xin Li; Shengju Liu; Xingyun Zhao; Jing Wu; Xiaohui Kang; Hongqiang Qin; Zaifa Pan; Ren'an Wu
Journal:  ACS Appl Mater Interfaces       Date:  2016-12-16       Impact factor: 9.229

7.  Preparation of Ti(4+)-immobilized modified silica capillary trapping column for on-line selective enrichment of phosphopeptides.

Authors:  Huili Yang; Chunhui Deng; Xiangmin Zhang
Journal:  Talanta       Date:  2016-03-10       Impact factor: 6.057

8.  Preparation of iminodiacetic acid functionalized silica capillary trap column for on-column selective enrichment of N-linked glycopeptides.

Authors:  Haizhu Lin; Xi Shao; Yan Lu; Chunhui Deng
Journal:  Talanta       Date:  2018-06-09       Impact factor: 6.057

9.  The design and synthesis of a hydrophilic core-shell-shell structured magnetic metal-organic framework as a novel immobilized metal ion affinity platform for phosphoproteome research.

Authors:  Man Zhao; Chunhui Deng; Xiangmin Zhang
Journal:  Chem Commun (Camb)       Date:  2014-04-30       Impact factor: 6.222

10.  Development of immobilized Sn4+ affinity chromatography material for highly selective enrichment of phosphopeptides.

Authors:  Haizhu Lin; Chunhui Deng
Journal:  Proteomics       Date:  2016-11       Impact factor: 3.984

View more
  3 in total

1.  Extraction of nucleobases, nucleosides and nucleotides by employing a magnetized graphene oxide functionalized with hydrophilic phytic acid and titanium(IV) ions.

Authors:  Qian Zhang; Dong-Dong Zhou; Fan Li; Yin-Zhen Wang; Feng-Qing Yang
Journal:  Mikrochim Acta       Date:  2019-02-15       Impact factor: 5.833

2.  A polymer monolith composed of a perovskite and cucurbit[6]uril hybrid for highly selective enrichment of phosphopeptides prior to mass spectrometric analysis.

Authors:  Haijiao Zheng; Qiong Jia
Journal:  Mikrochim Acta       Date:  2019-12-18       Impact factor: 5.833

3.  Titanium(IV)-functionalized zirconium-organic frameworks as dual-metal affinity probe for recognition of endogenous phosphopeptides prior to mass spectrometric quantification.

Authors:  Haoyang Zheng; Jiaxi Wang; Mingxia Gao; Xiangmin Zhang
Journal:  Mikrochim Acta       Date:  2019-11-21       Impact factor: 5.833

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.