| Literature DB >> 30488040 |
Todd Karsies1, Melissa Moore-Clingenpeel2, Mark Hall1.
Abstract
BACKGROUND: Risk-based guidelines aid empiric antibiotic selection for critically ill adults with suspected infection with Gram-negative bacilli with high potential for antibiotic resistance (termed high-risk GNRs). Neither evidence-based guidelines for empiric antibiotic selection nor validated risk factors predicting high-risk GNR growth exist for critically ill children. We developed and validated a model for predicting high-risk GNR growth in critically ill children with suspected infection.Entities:
Keywords: Gram-negative bacterial infections; critical illness; drug resistance; pediatric intensive care unit; risk factors
Year: 2018 PMID: 30488040 PMCID: PMC6247662 DOI: 10.1093/ofid/ofy278
Source DB: PubMed Journal: Open Forum Infect Dis ISSN: 2328-8957 Impact factor: 3.835
Population Characteristics and Risk Factors
| Derivation Cohort | Validation Cohort | |
|---|---|---|
| Baseline characteristics | ||
| Age, yb,c | 4 (0.75–14) | 5 (0.75–13) |
| Male sexb | 249 (51) | 242 (54) |
| Admission PRISM IIIb,c | 5 (2–10) | 6 (2–11) |
| Risk factors | ||
| Hospital >48 h | 169 (30) | 151 (29) |
| Recent antibiotics | 146 (26) | 145 (28) |
| Chronic lung disease | 80 (24) | 92 (18) |
| Congenital heart disease | 42 (8) | 7 (1) |
| Immunosuppressed | 59 (11) | 94 (18) |
| Chronic care facility | 24 (4) | 23 (4) |
| Prior high-risk GNRs | 146 (26) | 125 (24) |
| Recent hospitalization | 96 (17) | 75 (14) |
| Central venous line | 31 (6) | 110 (21) |
| Prematurity | 13 (2) | 34 (6) |
| Age <1 y | 172 (32) | 140 (27) |
| Viral testing | 203 (37) | 385 (73) |
| Outcomes | ||
| Culture + | 323 (58) | 325 (62) |
| High-risk GNR + | 139 (25) | 114 (22) |
Data are reported on a per-episode basis unless otherwise noted. Values are reported as No. (%) unless otherwise noted.
Abbreviations: GNR, Gram-negative bacilli; PRISM III, Pediatric Risk of Mortality III.
aNumber of infectious episodes.
bData are per patient (n = 489 for the derivation cohort and 447 for the validation cohort).
cExpressed as median (interquartile range).
Bacteria Identified in Culture Listed as the Percentage of Total Identified Organisms
| Organism | Derivation Cohort, No. (%) | Validation Cohort, No. (%) | Combined Cohort, No. (%) |
|---|---|---|---|
| High-risk GNRs | |||
|
| 99 (19.5) | 78 (14.5) | 177 (16.9) |
|
| 21 (4.1) | 16 (3.0) | 37 (3.5) |
|
| 14 (2.8) | 16 (3.0) | 30 (2.9) |
|
| 13 (2.6) | 12 (2.2) | 25 (2.4) |
|
| 7 (1.4) | 14 (2.6) | 21 (2.0) |
| Other high-risk GNRs | 27 (5.3) | 19 (3.5) | 46 (4.4) |
| Low-risk organisms | |||
| Gram-negative bacteria | 177 (34.9) | 202 (37.5) | 379 (36.2) |
| Gram-positive bacteria | 126 (24.9) | 167 (31.0) | 293 (28.0) |
| Other pathogensa | 23 (4.5) | 15 (2.8) | 38 (3.6) |
Organisms identified from more than 1 site in a single infectious episode are only listed once.
Abbreviation: GNR, Gram-negative bacilli.
aIncludes fungal pathogens and Mycoplasma.
Final Predictive Model for Growth of High-risk GNRs Including Derived Risk Scores From a Multivariable Logistic Regression Model
| Risk Factor | Coefficient | OR | Lower CL | Upper CL |
| Score |
|---|---|---|---|---|---|---|
| Intercept | –2.8004 | |||||
| Hospital >48 h | 1.3785 | 3.969 | 2.299 | 6.853 | <.0001 | 100 |
| Recent antibiotics | 0.8433 | 2.324 | 1.421 | 3.802 | .0008 | 61 |
| Chronic lung disease | 1.1899 | 3.287 | 1.735 | 6.225 | .0003 | 86 |
| Chronic care facility | 1.3091 | 3.703 | 1.387 | 9.887 | .009 | 95 |
| Prior high-risk GNRs | 1.2029 | 3.33 | 2.005 | 5.529 | <.0001 | 87 |
| Recent hospitalization | 1.0151 | 2.76 | 1.543 | 4.936 | .0006 | 74 |
Abbreviations: CL, confidence limit; GNR, Gram-negative bacilli; OR, odds ratio.
Predictive Model Performance in Derivation and Validation Cohorts Including Bootstrap-Estimated Training Bias for the Derivation Cohort
| Statistic | All Eventsa | First Eventb | ||||
|---|---|---|---|---|---|---|
| Derivation | Bias | Validation | Derivation | Bias | Validation | |
| AUC | 0.72 | –0.024 | 0.72 | 0.73 | –0.051 | 0.74 |
| Brier | 0.16 | 0.004 | 0.14 | 0.006 | ||
| Sensitivity | 0.96 | –0.019 | 0.93 | 0.95 | –0.014 | 0.91 |
| Specificity | 0.48 | –0.03 | 0.51 | 0.52 | –0.087 | 0.58 |
| PPV | 0.38 | –0.021 | 0.35 | 0.34 | –0.025 | 0.34 |
| NPV | 0.98 | –0.016 | 0.93 | 0.98 | –0.017 | 0.96 |
“Derivation” values are estimated from the final derivation model. “Bias” values are bootstrap estimates of the amount by which the given parameter would change in a new cohort, and they are a measure of internal validity. “Validation” values are estimated from the validation cohort.
Abbreviations: AUC, area under the curve; NPV, negative predictive value; PPV, positive predictive value.
aPrimary analysis, including all infectious episodes.
bSensitivity analysis, including only the first infectious episode per patient.