| Literature DB >> 30487959 |
R Yaghobi1, F Alizadeh2, A Khodavandi3.
Abstract
BACKGROUND: Syndrome of transient bone marrow suppression may result from various extra-hematological diseases, such as immunological deregulations, and viral infectious diseases secondarily affecting the function of hematopoietic stem cells.Entities:
Keywords: Bone marrow; Cytomegalovirus; Human herpes virus 8; Interleukin 10
Year: 2018 PMID: 30487959 PMCID: PMC6252181
Source DB: PubMed Journal: Int J Organ Transplant Med ISSN: 2008-6482
Primers, type of PCR, restriction enzyme and thermocycling program for the SNPs of IL10 genotyping
| Locus | Primers | Method | Thermocycling program | Fragment length (Base pairs) | ||
|---|---|---|---|---|---|---|
| IL10 (rs 1800896 -1082G/A) | Forward primer | 5’-CTCGCTGCAACCCAACTGGC-3’ | PCR-RFLP | 95 °C, 5 min; 35 cycles 95 °C, 30 sec 60/5 °C, 45 sec. 72 °C, 1 min; 72 °C, 5 min | GG:106,33bp | |
| Reverse primer | 5’-TCTTACCTATCCCTACTTCC-3’ | |||||
The frequency of the SNP of IL-10 genotypes and alleles between male and female gender in patients with bone marrow suppression
| Gene | Genotype | Female | Male | p value | OR (95% CI) |
|---|---|---|---|---|---|
| IL10 (1082) | AA | 3 (30) | 7 (47) | 0.40 | 0.49 (0.06–3.50) |
| GG | 2 (20) | 3 (20) | 1.00 | 1.00 (0.09–10.37) | |
| AG | 5 (50) | 5 (33) | 0.40 | 2.00 (0.29–14.38) | |
| A allele | 11 (55) | 19 (63) | 0.55 | 0.71 (0.19–2.61) | |
| G allele | 9 (45) | 11 (37) |
The frequency of IL10 genotypes and alleles in patients with bone marrow suppression compared with controls
| Gene | Genotype | Patients | Control | p value | OR (95% CI) |
|---|---|---|---|---|---|
| IL10 (1082) | AA | 10 (40) | 16 (16) | 0.008 | 3.50 (1.20–10.19) |
| GG | 5 (20) | 5 (5) | 0.01 | 4.75 1.06–21.45) | |
| AG | 10 (40) | 79 (79) | <0.001 | 0.18 (0.06–0.49) | |
| A allele | 30 (60) | 111 (55.5) | 0.56 | 1.20 (0.61–2.37) | |
| G allele | 20 (40) | 89 (44.5) |
The frequency of the SNP of IL10 genotypes and alleles between HHV8 infected and uninfected patients with bone marrow suppression
| Gene | Genotype | HHV8+ | HHV8– | p value | OR (95% CI) |
|---|---|---|---|---|---|
| IL10 (1082) | AA | 0 (0) | 9 (43) | 0.15 | 0.00 (0.00–3.98) |
| GG | 3 (100) | 2 (10) | <0.001 | — | |
| AG | 0 (0) | 10 (48) | 0.11 | 0.00 (0.00–3.26) | |
| A allele | 0 (0) | 28 (67) | 0.001 | 0.00 (0.00–0.55) | |
| G allele | 6 (100) | 14 (33) |
The frequency of the SNP of IL10 genotypes and alleles between CMV infected and uninfected patients with bone marrow suppression
| Gene | Genotype | CMV+ | CMV– | p value | OR (95% CI) |
|---|---|---|---|---|---|
| IL10 (1082) | AA | 1 (50) | 9 (38) | 0.72 | 1.67 (0.00–71.62) |
| GG | 0 (0) | 5 (21) | 0.47 | 0.00 (0.00–22.23) | |
| AG | 1 (50) | 10 (42) | 0.81 | 1.40 (0.00–59.74) | |
| A allele | 3 (75) | 28 (58) | 0.51 | 2.14 (0.17–57.69) | |
| G allele | 1 (25) | 20 (42) |