Literature DB >> 30486341

Deciphering the Role of the Non-Coding Genome in Regulating Gene-Diet Interactions.

Pui-Pik Law1, Michelle L Holland2.   

Abstract

Protein encoding genes constitute a small fraction of mammalian genomes. In addition to the protein coding genes, there are other functional units within the genome that are transcribed, but not translated into protein, the so called non-coding RNAs. There are many types of non-coding RNAs that have been identified and shown to have important roles in regulating gene expression either at the transcriptional or post-transcriptional level. A number of recent studies have highlighted that dietary manipulation in mammals can influence the expression or function of a number of classes of non-coding RNAs that contribute to the protein translation machinery. The identification of protein translation as a common target for nutritional regulation underscores the need to investigate how this may mechanistically contribute to phenotypes and diseases that are modified by nutritional intervention. Finally, we describe the state of the art and the application of emerging '-omics' technologies to address the regulation of protein translation in response to diet.

Entities:  

Keywords:  RNA modifications; epigenetics; epitranscriptome; gene-diet interaction; non-coding RNA; omics; protein translation; ribosome

Mesh:

Substances:

Year:  2018        PMID: 30486341      PMCID: PMC6316136          DOI: 10.3390/nu10121831

Source DB:  PubMed          Journal:  Nutrients        ISSN: 2072-6643            Impact factor:   5.717


  93 in total

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Authors:  Tamás Kiss
Journal:  Cell       Date:  2002-04-19       Impact factor: 41.582

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Journal:  EMBO J       Date:  2002-09-02       Impact factor: 11.598

Review 4.  Life on a planet of its own: regulation of RNA polymerase I transcription in the nucleolus.

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Journal:  Genes Dev       Date:  2003-07-15       Impact factor: 11.361

5.  Sfp1 is a stress- and nutrient-sensitive regulator of ribosomal protein gene expression.

Authors:  Rosa M Marion; Aviv Regev; Eran Segal; Yoseph Barash; Daphne Koller; Nir Friedman; Erin K O'Shea
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-07       Impact factor: 11.205

6.  Epigenetic mechanism of rRNA gene silencing: temporal order of NoRC-mediated histone modification, chromatin remodeling, and DNA methylation.

Authors:  Raffaella Santoro; Ingrid Grummt
Journal:  Mol Cell Biol       Date:  2005-04       Impact factor: 4.272

7.  Impact of low birth weight and cardiovascular risk factors on endothelial function in early adult life.

Authors:  C P Leeson; M Kattenhorn; R Morley; A Lucas; J E Deanfield
Journal:  Circulation       Date:  2001-03-06       Impact factor: 29.690

8.  Ribosome structure and activity are altered in cells lacking snoRNPs that form pseudouridines in the peptidyl transferase center.

Authors:  Thomas H King; Ben Liu; Ryan R McCully; Maurille J Fournier
Journal:  Mol Cell       Date:  2003-02       Impact factor: 17.970

9.  Relationship between birth weight and cardiovascular risk factors in Japanese young adults.

Authors:  T Suzuki; J Minami; M Ohrui; T Ishimitsu; H Matsuoka
Journal:  Am J Hypertens       Date:  2000-08       Impact factor: 2.689

10.  The nucleolar remodeling complex NoRC mediates heterochromatin formation and silencing of ribosomal gene transcription.

Authors:  Raffaella Santoro; Junwei Li; Ingrid Grummt
Journal:  Nat Genet       Date:  2002-10-07       Impact factor: 38.330

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