| Literature DB >> 30483349 |
Cathalijn H C Leenaars1,2, Jennifer Freymann3, Koen Jakobs1, Julia M L Menon1, Thomas J Van Ee1, Janneke Elzinga1, Rosalie W M Kempkes1, Bea Zoer1, Pim W H I M Drinkenburg4.
Abstract
BACKGROUND: Microdialysis can be used to measure amino acids in the extracellular space in vivo, based on the principle of diffusion. Variations in experimental set-up result in variations in baseline levels of the compounds measured. Variations may also be due to circadian rhythms.Entities:
Keywords: Amino acids; Histamine; Microdialysis; Systematic map; circadian rhythm
Year: 2018 PMID: 30483349 PMCID: PMC6196574 DOI: 10.5334/jcr.172
Source DB: PubMed Journal: J Circadian Rhythms ISSN: 1740-3391
Figure 1Flow scheme of retrieved and included references. TiAb – Title-Abstract; μD = microdialysis.
Number of references by compound and concordance between screeners.
| Compound | Concordance in subset (%) | Number of references retrieved |
|---|---|---|
| Asparagine | 98.6 | 60 |
| Aspartate | 95.7 | 600 |
| GABA | 93.6 | 918 |
| Glutamine | 95.7 | 253 |
| Glutamate | 93.6 | 1876 |
| Glycine | 99.3 | 338 |
| Histamine | 99.3 | 102 |
| Proline | 100 | 6 |
| Taurine | 94.3 | 411 |
Microdialysis studies on aspartate circadian rhythms.
| Study_ID | Species | Strain | Brain Area | Summary |
|---|---|---|---|---|
| Honma_1996b | Rats | Wistar | SCN | Asp is higher during the dark than during the light phase |
| Honma_1996d | Rats | Wistar | SCN | |
| Glass_1993b | Hamsters | Home bred | SCN | |
SCN: SupraChiasmatic Nucleus; Asp: Aspartate.
Microdialysis studies on GABA circadian rhythms.
| Study_ID | Species | Strain | Brain Area | Summary |
|---|---|---|---|---|
| Castaneda_2004b | Rats | Wistar | Striatum | GABA shows no significant circadian variation, although it may be higher during dark than during light |
| Castaneda_2004e | Rats | Wistar | NAcc | |
| MarquezdePrado_2000b | Rats | Wistar | Neostriatum | GABA is higher during the dark than during the light phase |
| Meng_2015 | Rats | Spraque-Dawley | Striatum | |
NAcc: Nucleus Accumbens; GABA: gamma-aminobutyric acid.
Microdialysis studies on glutamate circadian rhythms.
| Study_ID | Species | Strain | Brain Area | Summary |
|---|---|---|---|---|
| Castaneda_2004a | Rats | Wistar | Striatum | Glu is higher during the dark than during the light phase |
| Castaneda_2004d | Rats | Wistar | NAcc | |
| Honma_1996a | Rats | Wistar | SCN | |
| Honma_1996c | Rats | Wistar | SCN | |
| MarquezdePrado_2000a | Rats | Wistar | Neostriatum | |
| Glass_1993a | Hamsters | Home bred | SCN | |
| Meng_2015 | Rats | Spraque-Dawley | Striatum | |
NAcc: Nucleus Accumbens; SCN: SupraChiasmatic Nucleus; Glu: glutamate.
Microdialysis studies on glutamine circadian rhythms.
| Study_ID | Species | Strain | Brain Area | Summary |
|---|---|---|---|---|
| Castaneda_2004c | Rats | Wistar | Striatum | Gln shows no circadian rhythm |
| Castaneda_2004f | Rats | Wistar | NAcc | |
| MarquezdePrado_2000c | Rats | Wistar | Neostriatum | |
| Glass_1993c | Hamsters | homebred | SCN | |
NAcc: Nucleus Accumbens; SCN: SupraChiasmatic Nucleus; Gln: glutamine.
Microdialysis studies on histamine circadian rhythms.
| Study_ID | Species | Strain | Brain Area | Summary |
|---|---|---|---|---|
| Fell_2015 | Rat | Spraque-Dawley | mPFC | Hist is higher during the dark than during the light phase |
| Chu_2004 | Rats | Spraque-Dawley | Frontal cortex | |
| Hong_2005 | Rats | Spraque-Dawley | Frontal cortex | |
| Zant_2012 | Rat | Han-Wistar | BF | |
| Mochizuki_1992 | Rats | Wistar | Hypothalamus | |
| Rozov_2014 | Mice | C57BL6/J | Hypothalamus | |
mPFC: medial Prefrontal Cortex; BF: Basal Forebrain; Hist: histamine.