Literature DB >> 30482857

Mechanism of the E2 to E1 transition in Ca2+ pump revealed by crystal structures of gating residue mutants.

Naoki Tsunekawa1, Haruo Ogawa1, Junko Tsueda1, Toshihiko Akiba1, Chikashi Toyoshima2.   

Abstract

Ca2+-ATPase of sarcoplasmic reticulum (SERCA1a) pumps two Ca2+ per ATP hydrolyzed from the cytoplasm and two or three protons in the opposite direction. In the E2 state, after transferring Ca2+ into the lumen of sarcoplasmic reticulum, all of the acidic residues that coordinate Ca2+ are thought to be protonated, including the gating residue Glu309. Therefore a Glu309Gln substitution is not expected to significantly perturb the structure. Here we report crystal structures of the Glu309Gln and Glu309Ala mutants of SERCA1a under E2 conditions. The Glu309Gln mutant exhibits, unexpectedly, large structural rearrangements in both the cytoplasmic and transmembrane domains, apparently uncoupling them. However, the structure definitely represents E2 and, together with the help of quantum chemical calculations, allows us to postulate a mechanism for the E2 → E1 transition triggered by deprotonation of Glu309.

Entities:  

Keywords:  SERCA; deprotonation; ion pump; quantum chemical calculation

Mesh:

Substances:

Year:  2018        PMID: 30482857      PMCID: PMC6294896          DOI: 10.1073/pnas.1815472115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

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Authors:  C Toyoshima; M Nakasako; H Nomura; H Ogawa
Journal:  Nature       Date:  2000-06-08       Impact factor: 49.962

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Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-14       Impact factor: 11.205

4.  Do transmembrane segments in proteolyzed sarcoplasmic reticulum Ca(2+)-ATPase retain their functional Ca2+ binding properties after removal of cytoplasmic fragments by proteinase K?

Authors:  B Juul; H Turc; M L Durand; A Gomez de Gracia; L Denoroy; J V Møller; P Champeil; M le Maire
Journal:  J Biol Chem       Date:  1995-08-25       Impact factor: 5.157

5.  Adenosine 5'-triphosphate dependent fluxes of manganese and and hydrogen ions in sarcoplasmic reticulum vesicles.

Authors:  M Chiesi; G Inesi
Journal:  Biochemistry       Date:  1980-06-24       Impact factor: 3.162

6.  Protein-phospholipid interplay revealed with crystals of a calcium pump.

Authors:  Yoshiyuki Norimatsu; Kazuya Hasegawa; Nobutaka Shimizu; Chikashi Toyoshima
Journal:  Nature       Date:  2017-05-03       Impact factor: 49.962

7.  The sarcolipin-bound calcium pump stabilizes calcium sites exposed to the cytoplasm.

Authors:  Anne-Marie L Winther; Maike Bublitz; Jesper L Karlsen; Jesper V Møller; John B Hansen; Poul Nissen; Morten J Buch-Pedersen
Journal:  Nature       Date:  2013-03-03       Impact factor: 49.962

8.  Comparing crystal structures of Ca(2+) -ATPase in the presence of different lipids.

Authors:  Nikolaj D Drachmann; Claus Olesen; Jesper V Møller; Zheng Guo; Poul Nissen; Maike Bublitz
Journal:  FEBS J       Date:  2014-09-11       Impact factor: 5.542

9.  High-yield heterologous expression of wild type and mutant Ca(2+) ATPase: Characterization of Ca(2+) binding sites by charge transfer.

Authors:  Yueyong Liu; Rajendra Pilankatta; David Lewis; Giuseppe Inesi; Francesco Tadini-Buoninsegni; Gianluca Bartolommei; Maria Rosa Moncelli
Journal:  J Mol Biol       Date:  2009-06-24       Impact factor: 5.469

10.  Inhibition of the sarcoplasmic reticulum Ca2+ transport ATPase by thapsigargin at subnanomolar concentrations.

Authors:  Y Sagara; G Inesi
Journal:  J Biol Chem       Date:  1991-07-25       Impact factor: 5.157

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  10 in total

1.  Crystal structure of a human plasma membrane phospholipid flippase.

Authors:  Hanayo Nakanishi; Katsumasa Irie; Katsumori Segawa; Kazuya Hasegawa; Yoshinori Fujiyoshi; Shigekazu Nagata; Kazuhiro Abe
Journal:  J Biol Chem       Date:  2020-06-03       Impact factor: 5.157

2.  What ATP binding does to the Ca2+ pump and how nonproductive phosphoryl transfer is prevented in the absence of Ca2.

Authors:  Yoshiki Kabashima; Haruo Ogawa; Rie Nakajima; Chikashi Toyoshima
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-16       Impact factor: 11.205

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4.  Cryo-EM structures of recombinant human sodium-potassium pump determined in three different states.

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5.  Angle change of the A-domain in a single SERCA1a molecule detected by defocused orientation imaging.

Authors:  Takanobu A Katoh; Takashi Daiho; Kazuo Yamasaki; Stefania Danko; Shoko Fujimura; Hiroshi Suzuki
Journal:  Sci Rep       Date:  2021-07-01       Impact factor: 4.379

Review 6.  Linking Biochemical and Structural States of SERCA: Achievements, Challenges, and New Opportunities.

Authors:  Rodrigo Aguayo-Ortiz; L Michel Espinoza-Fonseca
Journal:  Int J Mol Sci       Date:  2020-06-10       Impact factor: 5.923

Review 7.  Endoplasmic Reticulum Calcium Pumps and Tumor Cell Differentiation.

Authors:  Bela Papp; Sophie Launay; Pascal Gélébart; Atousa Arbabian; Agnes Enyedi; Jean-Philippe Brouland; Edgardo D Carosella; Homa Adle-Biassette
Journal:  Int J Mol Sci       Date:  2020-05-09       Impact factor: 5.923

8.  The SERCA residue Glu340 mediates interdomain communication that guides Ca2+ transport.

Authors:  Maxwell M G Geurts; Johannes D Clausen; Bertrand Arnou; Cédric Montigny; Guillaume Lenoir; Robin A Corey; Christine Jaxel; Jesper V Møller; Poul Nissen; Jens Peter Andersen; Marc le Maire; Maike Bublitz
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-23       Impact factor: 12.779

9.  Sarcoplasmic Reticulum from Horse Gluteal Muscle Is Poised for Enhanced Calcium Transport.

Authors:  Joseph M Autry; Bengt Svensson; Samuel F Carlson; Zhenhui Chen; Razvan L Cornea; David D Thomas; Stephanie J Valberg
Journal:  Vet Sci       Date:  2021-11-23

10.  Structural Basis for the Function of the C-Terminal Proton Release Pathway in the Calcium Pump.

Authors:  L Michel Espinoza-Fonseca
Journal:  Int J Mol Sci       Date:  2021-03-29       Impact factor: 5.923

  10 in total

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