Literature DB >> 3047680

The UAS of the yeast PGK gene is composed of multiple functional elements.

A Chambers1, C Stanway, A J Kingsman, S M Kingsman.   

Abstract

The UAS (upstream activator sequence) of the yeast PGK gene contains a transcriptional activator domain located between bases -479 and -402 upstream from the initiating ATG. This region of the UAS contains three direct repeats of the sequence 5'CTTCC3'. The roles in transcriptional activation of these repeats and other sequences within the activator domain were investigated. When short regions containing the repeats were removed PGK expression was considerably reduced, the magnitude of the effect depended upon which CTTCC block was absent. Sequences between -473 and -458 which did not contain a CTTCC block were also shown to be necessary for high levels of PGK expression. A DNA fragment containing activator sequences up to -473 was shown to interact specifically in vitro with a yeast nuclear protein extract. DNase I footprinting identified a protected region between -473 and -458 and single base changes in DNase I sensitivity at the CTTCC repeats.

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Year:  1988        PMID: 3047680      PMCID: PMC338556          DOI: 10.1093/nar/16.17.8245

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  37 in total

1.  A nuclear factor that binds to a conserved sequence motif in transcriptional control elements of immunoglobulin genes.

Authors:  H Singh; R Sen; D Baltimore; P A Sharp
Journal:  Nature       Date:  1986 Jan 9-15       Impact factor: 49.962

2.  TUF, the yeast DNA-binding factor specific for UASrpg upstream activating sequences: identification of the protein and its DNA-binding domain.

Authors:  J Huet; A Sentenac
Journal:  Proc Natl Acad Sci U S A       Date:  1987-06       Impact factor: 11.205

3.  Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose.

Authors:  P S Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  1980-09       Impact factor: 11.205

4.  Purification and cloning of a DNA binding protein from yeast that binds to both silencer and activator elements.

Authors:  D Shore; K Nasmyth
Journal:  Cell       Date:  1987-12-04       Impact factor: 41.582

5.  A short nucleotide sequence required for regulation of HIS4 by the general control system of yeast.

Authors:  T F Donahue; R S Daves; G Lucchini; G R Fink
Journal:  Cell       Date:  1983-01       Impact factor: 41.582

6.  The protein factor which binds to the upstream activating sequence of Saccharomyces cerevisiae ENO1 gene.

Authors:  M Machida; H Uemura; Y Jigami; H Tanaka
Journal:  Nucleic Acids Res       Date:  1988-02-25       Impact factor: 16.971

7.  Isolation and identification of yeast messenger ribonucleic acids coding for enolase, glyceraldehyde-3-phosphate dehydrogenase, and phosphoglycerate kinase.

Authors:  M J Holland; J P Holland
Journal:  Biochemistry       Date:  1978-11-14       Impact factor: 3.162

8.  Efficient synthesis of enzymatically active calf chymosin in Saccharomyces cerevisiae.

Authors:  J Mellor; M J Dobson; N A Roberts; M F Tuite; J S Emtage; S White; P A Lowe; T Patel; A J Kingsman; S M Kingsman
Journal:  Gene       Date:  1983-09       Impact factor: 3.688

9.  A gel electrophoresis method for quantifying the binding of proteins to specific DNA regions: application to components of the Escherichia coli lactose operon regulatory system.

Authors:  M M Garner; A Revzin
Journal:  Nucleic Acids Res       Date:  1981-07-10       Impact factor: 16.971

10.  A general upstream binding factor for genes of the yeast translational apparatus.

Authors:  J Huet; P Cottrelle; M Cool; M L Vignais; D Thiele; C Marck; J M Buhler; A Sentenac; P Fromageot
Journal:  EMBO J       Date:  1985-12-16       Impact factor: 11.598

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  33 in total

1.  DNA sequences required for yeast actin gene transcription do not include conserved CCAAT motifs.

Authors:  J M Munholland; J K Kelly; A G Wildeman
Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

2.  ARS binding factor 1 binds adjacent to RAP1 at the UASs of the yeast glycolytic genes PGK and PYK1.

Authors:  A Chambers; C Stanway; J S Tsang; Y Henry; A J Kingsman; S M Kingsman
Journal:  Nucleic Acids Res       Date:  1990-09-25       Impact factor: 16.971

3.  Characterization of the transcriptional potency of sub-elements of the UAS of the yeast PGK gene in a PGK mini-promoter.

Authors:  C A Stanway; A Chambers; A J Kingsman; S M Kingsman
Journal:  Nucleic Acids Res       Date:  1989-11-25       Impact factor: 16.971

4.  Sequence and localization of the gene encoding yeast phosphoglycerate mutase.

Authors:  J Heinisch; R C von Borstel; R Rodicio
Journal:  Curr Genet       Date:  1991-07       Impact factor: 3.886

5.  Efficient transcription of the glycolytic gene ADH1 and three translational component genes requires the GCR1 product, which can act through TUF/GRF/RAP binding sites.

Authors:  G M Santangelo; J Tornow
Journal:  Mol Cell Biol       Date:  1990-02       Impact factor: 4.272

6.  Multiple domains of repressor activator protein 1 contribute to facilitated binding of glycolysis regulatory protein 1.

Authors:  M C López; J B Smerage; H V Baker
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-24       Impact factor: 11.205

7.  The yeast protein Gcr1p binds to the PGK UAS and contributes to the activation of transcription of the PGK gene.

Authors:  Y A Henry; M C López; J M Gibbs; A Chambers; S M Kingsman; H V Baker; C A Stanway
Journal:  Mol Gen Genet       Date:  1994-11-15

8.  Activation mechanism of the multifunctional transcription factor repressor-activator protein 1 (Rap1p).

Authors:  C M Drazinic; J B Smerage; M C López; H V Baker
Journal:  Mol Cell Biol       Date:  1996-06       Impact factor: 4.272

9.  A simple in vivo footprinting method to examine DNA-protein interactions over the yeast PYK UAS element.

Authors:  I Dumitru; J B McNeil
Journal:  Nucleic Acids Res       Date:  1994-04-25       Impact factor: 16.971

10.  Coordinated regulation and inositol-mediated and fatty acid-mediated repression of fatty acid synthase genes in Saccharomyces cerevisiae.

Authors:  S S Chirala
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-01       Impact factor: 11.205

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